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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS19335 and AZOBR_RS19340 are separated by 55 nucleotides
AZOBR_RS19340 and AZOBR_RS19345 are separated by 64 nucleotides
AZOBR_RS19345 and AZOBR_RS19350 are separated by 579 nucleotides
AZOBR_RS19350 and AZOBR_RS19355 are separated by 129 nucleotides
AZOBR_RS19335: AZOBR_RS19335 - asparagine synthase, at 1,106,554 to 1,108,506
_RS19335
AZOBR_RS19340: AZOBR_RS19340 - long-chain fatty acid--CoA ligase, at 1,108,562 to 1,110,121
_RS19340
AZOBR_RS19345: AZOBR_RS19345 - acyl carrier protein, at 1,110,186 to 1,110,449
_RS19345
AZOBR_RS19350: AZOBR_RS19350 - polysaccharide deacetylase, at 1,111,029 to 1,111,877
_RS19350
AZOBR_RS19355: AZOBR_RS19355 - glycosyl transferase family 1, at 1,112,007 to 1,112,972
_RS19355
Group
Condition
AZOBR
_RS19335
AZOBR
_RS19340
AZOBR
_RS19345
AZOBR
_RS19350
AZOBR
_RS19355
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.1
-0.1
N.D.
-0.3
-1.0
stress
Chlorite 1 mM
+0.0
-0.1
N.D.
-0.4
-0.7
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
-0.1
-0.1
N.D.
-0.7
-0.2
motility
inner cut, LB soft agar motility assay
-0.6
-0.1
N.D.
+0.3
-0.5
nitrogen source
L-Histidine (N)
-0.4
-0.0
N.D.
-0.3
+0.4
nitrogen source
nitrate (N)
-0.1
-0.2
N.D.
+0.6
-0.3
carbon source
Glycerol (C)
+0.4
+0.2
N.D.
+1.2
-1.6
stress
3-octanone 6.3476 mM
-0.3
+0.1
N.D.
+0.6
-0.1
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
+0.3
+0.3
N.D.
-0.5
+0.2
stress
2-pentyl-furan 2.671 mM
+0.0
-0.3
N.D.
+0.2
+0.8
carbon source
Glycerol (C)
+0.3
+0.2
N.D.
+1.5
-1.3
carbon source
L-Glutamine (C)
+0.1
+0.1
N.D.
+0.6
+0.2
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
+0.2
+0.1
N.D.
+0.3
+0.5
nitrogen source
L-Glutamic (N)
+0.2
+0.2
N.D.
+0.8
+0.2
carbon source
succinate (C)
+0.4
+0.3
N.D.
+0.4
+0.5
nitrogen source
Parabanic Acid (N)
+0.2
+0.2
N.D.
+0.8
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.0
+0.0
N.D.
+1.8
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
-0.0
N.D.
+0.7
+1.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
+0.2
N.D.
+0.6
+1.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.5
+0.5
N.D.
+1.1
+0.4
nitrogen source
Cytosine (N)
+0.7
+0.6
N.D.
+0.9
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.4
N.D.
+1.1
+0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.5
+0.5
N.D.
+1.3
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
-0.1
N.D.
+1.1
+1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
+0.3
N.D.
+1.3
+1.2
carbon source
a-Ketoglutaric (C)
+0.8
+0.8
N.D.
+0.9
+0.4
carbon source
a-Ketoglutaric (C)
+0.8
+0.9
N.D.
+1.1
+0.3
nitrogen source
L-Isoleucine (N)
+0.9
+1.0
N.D.
+1.0
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
+0.7
N.D.
+1.2
+0.8
nitrogen source
Cytosine (N)
+1.0
+1.0
N.D.
+1.2
+0.6
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