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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS19260 and AZOBR_RS19265 are separated by 308 nucleotides
AZOBR_RS19265 and AZOBR_RS19270 are separated by 30 nucleotides
AZOBR_RS19270 and AZOBR_RS19275 overlap by 11 nucleotides
AZOBR_RS19275 and AZOBR_RS19280 are separated by 13 nucleotides
AZOBR_RS19260: AZOBR_RS19260 - hypothetical protein, at 1,088,588 to 1,089,736
_RS19260
AZOBR_RS19265: AZOBR_RS19265 - sulfate transporter subunit, at 1,090,045 to 1,091,097
_RS19265
AZOBR_RS19270: AZOBR_RS19270 - sulfate transporter, at 1,091,128 to 1,091,988
_RS19270
AZOBR_RS19275: AZOBR_RS19275 - sulfate/thiosulfate transporter permease subunit, at 1,091,978 to 1,092,838
_RS19275
AZOBR_RS19280: AZOBR_RS19280 - sulfate ABC transporter ATP-binding protein, at 1,092,852 to 1,093,892
_RS19280
Group
Condition
AZOBR
_RS19260
AZOBR
_RS19265
AZOBR
_RS19270
AZOBR
_RS19275
AZOBR
_RS19280
carbon source
a-Ketoglutaric (C)
-1.1
-1.0
-1.3
-1.3
-1.6
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.5
-1.3
-0.9
-1.2
-1.6
nitrogen source
Parabanic Acid (N)
-0.0
-1.1
-1.4
-1.1
-1.6
carbon source
a-Ketoglutaric (C)
+0.1
-1.0
-1.1
-1.0
-1.6
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
+0.1
-1.3
-1.0
-1.2
-1.3
nitrogen source
Parabanic Acid (N)
+0.5
-1.0
-1.4
-1.3
-1.3
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
+0.2
-1.2
-1.1
-1.3
-0.9
nitrogen source
nitrate (N)
-0.3
-0.8
-0.9
-1.0
-1.0
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.1
-1.0
-0.6
-1.2
-0.9
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
+0.3
-1.4
-0.9
-1.0
-0.7
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
+0.4
-1.0
-1.0
-0.8
-1.3
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
+0.1
-1.0
-0.7
-0.9
-0.9
nitrogen source
D-Alanine (N)
+0.3
-0.9
-1.0
-0.8
-1.0
nitrogen source
D-Alanine (N)
+0.0
-0.7
-0.8
-0.9
-0.8
anaerobic; rich media
LB; anaerobic
-0.3
-0.9
-0.5
-0.7
-0.7
nitrogen source
L-Glutamic (N)
+0.5
-1.0
-0.9
-1.1
-0.5
carbon source
L-Malic (C)
+0.1
-0.5
-0.7
-0.7
-1.2
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
-0.1
-0.8
-0.5
-0.7
-0.7
carbon source
D-Lactate (C)
+0.3
-0.4
-0.9
-0.7
-0.9
nitrogen source
Glucuronamide (N)
+0.6
-0.7
-1.0
-0.7
-0.8
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
+0.8
-0.8
-1.0
-0.7
-0.8
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
+0.4
-0.9
-0.8
-0.6
-0.7
carbon source
pyruvate (C)
+0.7
-0.4
-0.8
-0.9
-0.7
carbon source
D-Gluconic Acid (C)
+0.4
-0.4
-0.6
-0.5
-0.9
stress
2-pentyl-furan 1.780666667 mM
-1.5
-0.3
+0.3
+0.1
+0.7
stress
Chlorite 1 mM
-1.1
-0.5
+0.3
+0.0
+0.8
nitrogen source
L-Isoleucine (N)
-0.7
+1.1
+0.1
-0.3
+0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.8
+0.5
+0.7
+0.0
+1.2
stress
Paraquat dichloride 0.04 mg/ml
-0.4
+0.7
+0.6
+0.6
+1.0
stress
D-Cycloserine 0.125 mg/ml
+1.0
-0.0
+0.6
+1.0
+1.5
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