Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS18565 and AZOBR_RS18570 are separated by 18 nucleotidesAZOBR_RS18570 and AZOBR_RS18580 are separated by 2940 nucleotidesAZOBR_RS18580 and AZOBR_RS18585 overlap by 78 nucleotidesAZOBR_RS18585 and AZOBR_RS18590 are separated by 432 nucleotides AZOBR_RS18565: AZOBR_RS18565 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 934,581 to 937,046 _RS18565 AZOBR_RS18570: AZOBR_RS18570 - nitrite reductase, at 937,065 to 937,367 _RS18570 AZOBR_RS18580: AZOBR_RS18580 - uroporphyrin-III methyltransferase, at 940,308 to 941,105 _RS18580 AZOBR_RS18585: AZOBR_RS18585 - peptidase, at 941,028 to 941,819 _RS18585 AZOBR_RS18590: AZOBR_RS18590 - hypothetical protein, at 942,252 to 942,572 _RS18590
Group Condition AZOBR_RS18565 AZOBR_RS18570 AZOBR_RS18580 AZOBR_RS18585 AZOBR_RS18590
nitrogen source nitrate (N) -4.4 -4.9 N.D. -0.0 -0.2
nitrogen source nitrate (N) -3.3 -5.6 N.D. -0.6 +0.2
nitrogen source D-Alanine (N) -0.3 -0.5 N.D. -2.8 -0.3
stress 3-octanone 6.3476 mM -0.2 +0.3 N.D. -3.7 +0.3
nitrogen source D-Alanine (N) -0.4 -0.6 N.D. -2.3 -0.0
stress 2-pentyl-furan 1.335528 mM -0.2 -0.2 N.D. -2.1 +0.0
stress 2-pentyl-furan 1.335528 mM +0.1 -0.6 N.D. -1.6 -0.2
stress 2-pentyl-furan 1.780666667 mM -0.2 -0.4 N.D. -1.4 -0.2
stress 2-pentyl-furan 2.671 mM +0.0 -0.3 N.D. -1.8 +0.1
stress 3-octanone 5.2896 mM -0.1 -0.0 N.D. -1.7 -0.0
stress 3-octanone 6.3476 mM +0.2 -0.0 N.D. -2.3 +0.3
anaerobic; rich media LB; anaerobic -0.0 +0.2 N.D. -1.7 -0.1
stress 3-octanone 5.2896 mM +0.0 +0.1 N.D. -1.8 +0.1
nitrogen source L-Glutamic (N) -0.4 -0.8 N.D. -0.3 +0.1
nitrogen source L-Threonine (N) -0.3 -0.4 N.D. -0.8 +0.0
stress 2-pentyl-furan 1.335528 mM +0.1 -0.4 N.D. -1.2 +0.1
stress 3-octanone 4.2317 mM -0.1 +0.2 N.D. -1.6 +0.2
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.1 +0.2 N.D. -1.7 +0.3
stress 3-octanone 6.3476 mM +0.2 -0.1 N.D. -1.3 +0.0
stress 3-octanone 6.3476 mM -0.1 +0.3 N.D. -1.5 +0.2
stress 3-octanone 5.2896 mM +0.1 +0.1 N.D. -1.4 +0.1
stress 3-octanone 4.2317 mM -0.2 +0.1 N.D. -1.1 +0.0
stress 3-octanone 5.2896 mM +0.0 -0.0 N.D. -1.3 +0.2
stress 3-octanone 4.2317 mM +0.1 -0.0 N.D. -1.3 +0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.1 +0.2 N.D. -1.2 -0.1
nitrogen source L-Isoleucine (N) -0.1 -0.6 N.D. +0.2 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -0.5 N.D. +0.5 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.4 N.D. -0.3 +0.4
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.1 +0.3 N.D. +1.2 +0.0
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.2 +0.3 N.D. +1.0 +0.2
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