Fitness for 5 genes in Azospirillum brasilense Sp245

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	AZOBR_RS18525	AZOBR_RS18530	AZOBR_RS18535	AZOBR_RS18540	AZOBR_RS18545
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.9	-0.8	-0.3	N.D.	-2.0
nitrogen source	nitrate (N)	+0.2	+0.1	-0.1	N.D.	-4.6
nitrogen source	nitrate (N)	+0.4	-0.4	+0.1	N.D.	-3.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+0.3	+0.1	N.D.	-3.9
motility	inner cut, LB soft agar motility assay	-0.8	-0.1	-0.1	N.D.	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.1	-1.7	-1.0	N.D.	-0.8
stress	Paraquat dichloride 0.02 mg/ml	-1.0	-0.2	-0.2	N.D.	-0.7
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.9	-0.4	+0.1	N.D.	-0.4
stress	Chlorite 1 mM	-0.5	+0.0	-0.4	N.D.	-0.7
stress	nitrite 10 mM	-0.0	+0.0	-0.3	N.D.	-1.2
nitrogen source	L-Phenylalanine (N)	+0.5	-0.2	-0.1	N.D.	-1.6
stress	3-octanone 5.2896 mM	-0.6	-0.4	+0.1	N.D.	-0.4
nitrogen source	L-Citrulline (N)	-0.0	+0.2	+0.1	N.D.	-1.4
lb	LB	-0.9	+0.0	+0.2	N.D.	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	-0.8	+0.1	N.D.	-1.0
carbon source	D-Gluconic Acid (C)	+0.4	-0.0	-0.1	N.D.	-1.1
nitrogen source	D-Alanine (N)	+0.5	+0.0	-0.1	N.D.	-1.3
nitrogen source	L-Threonine (N)	-0.2	-0.4	-0.4	N.D.	+0.5
motility	outer cut, LB soft agar motility assay	-2.0	+0.4	+0.2	N.D.	+0.8
stress	2-pentyl-furan 2.671 mM	+0.0	-0.6	-0.5	N.D.	+0.6
stress	D-Cycloserine 0.125 mg/ml	-0.3	-0.5	-0.2	N.D.	+0.9
nitrogen source	L-Isoleucine (N)	+0.9	-0.4	+0.8	N.D.	-1.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.8	-0.2	+0.2	N.D.	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.1	-0.7	+0.6	N.D.	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8	-0.1	+0.5	N.D.	-0.4
lb	LB	+0.2	+0.4	-0.3	N.D.	+1.0
nitrogen source	casaminos (N)	-0.2	+0.2	+0.4	N.D.	+1.1
nitrogen source	L-Serine (N)	+0.1	+0.2	-0.1	N.D.	+1.4
nitrogen source	casaminos (N)	+0.6	+0.0	+0.4	N.D.	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.0	-0.1	N.D.	+2.3