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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS18360 and AZOBR_RS18365 are separated by 70 nucleotides
AZOBR_RS18365 and AZOBR_RS18370 are separated by 181 nucleotides
AZOBR_RS18370 and AZOBR_RS18375 are separated by 316 nucleotides
AZOBR_RS18375 and AZOBR_RS18380 are separated by 239 nucleotides
AZOBR_RS18360: AZOBR_RS18360 - hypothetical protein, at 884,998 to 885,576
_RS18360
AZOBR_RS18365: AZOBR_RS18365 - hypothetical protein, at 885,647 to 885,889
_RS18365
AZOBR_RS18370: AZOBR_RS18370 - aspartate decarboxylase, at 886,071 to 886,505
_RS18370
AZOBR_RS18375: AZOBR_RS18375 - chemotaxis protein, at 886,822 to 887,127
_RS18375
AZOBR_RS18380: AZOBR_RS18380 - chemotaxis protein, at 887,367 to 888,833
_RS18380
Group
Condition
AZOBR
_RS18360
AZOBR
_RS18365
AZOBR
_RS18370
AZOBR
_RS18375
AZOBR
_RS18380
carbon source
D-Gluconic Acid (C)
+0.2
-3.4
-0.4
-2.6
-2.3
nitrogen source
L-Isoleucine (N)
-0.1
-0.3
-0.1
-2.3
-4.2
carbon source
L-Leucine (C)
-0.1
-0.7
-0.3
-2.3
-2.7
nitrogen source
L-Threonine (N)
+0.2
-0.2
+0.1
-3.3
-3.0
nitrogen source
L-Citrulline (N)
-0.1
+0.2
-0.0
-3.7
-2.1
nitrogen source
L-Glutamic (N)
-0.2
-1.4
+0.2
-3.1
-1.1
carbon source
a-Ketoglutaric (C)
+0.1
+0.6
+0.2
-3.3
-2.6
stress
nitrite 10 mM
+0.2
-0.2
+0.2
-3.3
-1.8
nitrogen source
Cytosine (N)
+0.2
-0.7
+0.0
-2.6
-2.0
nitrogen source
D-Alanine (N)
+0.2
+0.8
+0.1
-3.6
-2.5
carbon source
D-Gluconic Acid (C)
+0.0
+0.5
-0.3
-3.0
-2.0
nitrogen source
L-Leucine (N)
+0.0
+0.1
-0.4
-2.8
-1.5
nitrogen source
L-Lysine (N)
+0.1
-0.2
+0.2
-2.5
-2.2
nitrogen source
L-Leucine (N)
+0.1
+1.0
-0.6
-1.9
-3.0
carbon source
succinate (C)
+0.1
+0.1
-0.1
-1.6
-2.9
nitrogen source
L-Threonine (N)
+0.1
-1.3
+0.2
-2.2
-1.2
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
+0.7
-1.5
+0.5
-1.5
-2.4
nitrogen source
L-Citrulline (N)
+0.2
+0.8
+0.2
-2.3
-2.5
nitrogen source
Cytosine (N)
+0.3
+1.0
+0.2
-2.4
-2.4
nitrogen source
Parabanic Acid (N)
+0.2
+0.8
-0.0
-2.9
-1.1
nitrogen source
Parabanic Acid (N)
+0.5
+0.1
+0.2
-2.4
-1.4
nitrogen source
Glucuronamide (N)
+0.0
+0.8
+0.1
-1.2
-2.3
nitrogen source
Urea (N)
+0.2
+1.1
+0.3
-1.6
-2.2
stress
nitrate 100 mM
-0.1
+1.3
+0.0
-1.5
-1.9
carbon source
succinate (C)
+0.1
+1.1
+0.2
-1.5
-1.7
lb
LB
+0.2
-2.3
-0.2
+1.4
+1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-2.0
+0.0
+1.6
+2.0
motility
inner cut, LB soft agar motility assay
+0.2
-1.5
+0.5
+1.0
+1.3
stress
D-Cycloserine 0.125 mg/ml
-0.2
-2.3
+0.0
+2.4
+2.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-1.0
+0.1
+1.7
+2.0
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