Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS16405 and AZOBR_RS16410 are separated by 184 nucleotidesAZOBR_RS16410 and AZOBR_RS16415 are separated by 613 nucleotidesAZOBR_RS16415 and AZOBR_RS16420 are separated by 63 nucleotidesAZOBR_RS16420 and AZOBR_RS16425 are separated by 217 nucleotides AZOBR_RS16405: AZOBR_RS16405 - hypothetical protein, at 429,453 to 430,568 _RS16405 AZOBR_RS16410: AZOBR_RS16410 - hypothetical protein, at 430,753 to 430,941 _RS16410 AZOBR_RS16415: AZOBR_RS16415 - hypothetical protein, at 431,555 to 432,139 _RS16415 AZOBR_RS16420: AZOBR_RS16420 - excinuclease ABC subunit B, at 432,203 to 434,341 _RS16420 AZOBR_RS16425: AZOBR_RS16425 - branched-chain amino acid aminotransferase, at 434,559 to 435,431 _RS16425
Group Condition AZOBR_RS16405 AZOBR_RS16410 AZOBR_RS16415 AZOBR_RS16420 AZOBR_RS16425
stress Sisomicin 0.01 mg/ml -1.2 -0.1 -0.8 -0.9 -0.0
stress Cobalt chloride 0.2 mM -1.4 -0.3 -0.5 -0.8 -0.1
nitrogen source L-Isoleucine (N) -0.2 -0.4 -1.0 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.0 +0.0 -0.9 -0.4
stress Cobalt chloride 0.3 mM -0.8 -0.1 +0.1 -1.0 -0.0
lb LB +0.5 -0.0 -0.9 -0.9 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 +0.0 +0.4 -0.7 -0.5
motility inner cut, LB soft agar motility assay +0.0 +0.0 -1.1 -0.7 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -0.0 +0.8 -1.0 -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.4 +0.2 -0.7 -0.3 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.2 +0.0 -1.0 -0.3
stress D-Cycloserine 0.125 mg/ml +0.1 -0.0 -0.1 -1.6 +0.4
carbon source D-Fructose (C) -1.0 -0.2 +0.3 -0.2 -0.0
stress 2-pentyl-furan 1.780666667 mM -1.5 +0.3 +0.6 -0.7 +0.4
stress 2-pentyl-furan 2.671 mM +0.3 +0.3 +0.1 -0.4 -0.7
motility inner cut, LB soft agar motility assay -0.3 +0.3 +0.4 -0.6 -0.2
stress 2-pentyl-furan 1.780666667 mM -0.3 -0.4 +0.6 -0.3 +0.2
stress 2-pentyl-furan 1.335528 mM -0.3 +0.2 +0.7 -0.4 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +0.2 -0.1 -0.7 -0.1
stress Paraquat dichloride 0.02 mg/ml +0.6 -0.1 +0.5 -0.4 -0.4
stress Paraquat dichloride 0.04 mg/ml +0.6 -0.1 +0.5 -0.3 -0.3
stress 6-Pentyl-2H-pyran-2-one 0.6266795 mM +0.6 +0.1 +0.5 -0.4 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 -0.2 +0.9 -0.9 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 -0.0 +0.9 -0.9 -0.1
stress 2-pentyl-furan 1.335528 mM -0.3 -0.1 +1.4 -0.4 -0.1
motility inner cut, LB soft agar motility assay +0.5 -0.3 +0.9 -0.6 +0.3
stress 6-Pentyl-2H-pyran-2-one 0.7162051667 mM +0.8 -0.1 +0.6 -0.2 -0.2
stress 3-octanone 5.2896 mM +0.9 +0.1 +0.4 -0.2 -0.2
lb no stress control LB no stress control +0.4 +0.1 +1.0 -0.2 +0.0
stress 3-octanone 6.3476 mM +0.9 +0.1 +0.6 -0.2 +0.3
remove
AZOBR_RS16405
plot
remove
AZOBR_RS16410
plot
remove
AZOBR_RS16415
remove
AZOBR_RS16420
plot
remove
AZOBR_RS16425
plot