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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS16325 and AZOBR_RS16330 are separated by 124 nucleotides
AZOBR_RS16330 and AZOBR_RS16335 are separated by 22 nucleotides
AZOBR_RS16335 and AZOBR_RS16340 are separated by 124 nucleotides
AZOBR_RS16340 and AZOBR_RS16345 are separated by 82 nucleotides
AZOBR_RS16325: AZOBR_RS16325 - short-chain dehydrogenase, at 411,256 to 412,017
_RS16325
AZOBR_RS16330: AZOBR_RS16330 - hypothetical protein, at 412,142 to 413,008
_RS16330
AZOBR_RS16335: AZOBR_RS16335 - guanylate kinase, at 413,031 to 413,666
_RS16335
AZOBR_RS16340: AZOBR_RS16340 - 16S rRNA methyltransferase, at 413,791 to 414,627
_RS16340
AZOBR_RS16345: AZOBR_RS16345 - exported protein of unknown function, at 414,710 to 415,276
_RS16345
Group
Condition
AZOBR
_RS16325
AZOBR
_RS16330
AZOBR
_RS16335
AZOBR
_RS16340
AZOBR
_RS16345
stress
D-Cycloserine 0.125 mg/ml
N.D.
N.D.
N.D.
-1.4
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
N.D.
N.D.
-1.3
+0.3
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
N.D.
N.D.
N.D.
-1.3
+0.3
nitrogen source
nitrate (N)
N.D.
N.D.
N.D.
-1.3
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
N.D.
+0.3
-1.3
stress
1-octen-3-ol 0.7753276667 mM
N.D.
N.D.
N.D.
-1.2
+0.3
stress
1-octen-3-ol 0.6030326667 mM
N.D.
N.D.
N.D.
-1.3
+0.5
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
N.D.
N.D.
-1.3
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
N.D.
N.D.
N.D.
-1.3
+0.5
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
N.D.
N.D.
-1.3
+0.4
stress
3-octanone 5.2896 mM
N.D.
N.D.
N.D.
-1.2
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
N.D.
N.D.
-1.3
+0.5
stress
3-octanone 4.2317 mM
N.D.
N.D.
N.D.
-1.2
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
N.D.
N.D.
-1.2
+0.5
stress
3-octanone 5.2896 mM
N.D.
N.D.
N.D.
-1.1
+0.4
stress
3-octanone 5.2896 mM
N.D.
N.D.
N.D.
-1.1
+0.5
stress
3-octanone 6.3476 mM
N.D.
N.D.
N.D.
-1.2
+0.7
stress
2-pentyl-furan 1.780666667 mM
N.D.
N.D.
N.D.
-1.0
+0.6
stress
3-octanone 6.3476 mM
N.D.
N.D.
N.D.
-1.0
+0.6
nitrogen source
casaminos (N)
N.D.
N.D.
N.D.
-0.8
+0.7
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
N.D.
N.D.
N.D.
+1.1
-0.5
stress
Bacitracin 0.25 mg/ml
N.D.
N.D.
N.D.
+1.3
-0.4
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
N.D.
N.D.
N.D.
+1.2
+0.3
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
N.D.
N.D.
N.D.
+1.4
+0.2
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
N.D.
+1.4
+0.2
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
N.D.
+1.2
+0.5
stress
Paraquat dichloride 0.02 mg/ml
N.D.
N.D.
N.D.
+1.5
+0.2
nitrogen source
L-Glutamic (N)
N.D.
N.D.
N.D.
+1.9
-0.1
stress
Cobalt chloride 0.2 mM
N.D.
N.D.
N.D.
+1.7
+0.6
stress
Cobalt chloride 0.3 mM
N.D.
N.D.
N.D.
+2.1
+0.4
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