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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS16295 and AZOBR_RS16300 are separated by 291 nucleotides
AZOBR_RS16300 and AZOBR_RS16305 are separated by 172 nucleotides
AZOBR_RS16305 and AZOBR_RS16315 are separated by 2108 nucleotides
AZOBR_RS16315 and AZOBR_RS16320 are separated by 143 nucleotides
AZOBR_RS16295: AZOBR_RS16295 - phosphoribosylglycinamide formyltransferase, at 405,532 to 406,200
_RS16295
AZOBR_RS16300: AZOBR_RS16300 - hypothetical protein, at 406,492 to 406,971
_RS16300
AZOBR_RS16305: AZOBR_RS16305 - nucleoside diphosphate kinase, at 407,144 to 407,566
_RS16305
AZOBR_RS16315: AZOBR_RS16315 - hypothetical protein, at 409,675 to 410,376
_RS16315
AZOBR_RS16320: AZOBR_RS16320 - phospholipid N-methyltransferase, at 410,520 to 411,134
_RS16320
Group
Condition
AZOBR
_RS16295
AZOBR
_RS16300
AZOBR
_RS16305
AZOBR
_RS16315
AZOBR
_RS16320
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-3.4
-1.0
N.D.
N.D.
-1.8
nitrogen source
L-Glutamic (N)
-4.4
-1.0
N.D.
N.D.
-0.8
carbon source
succinate (C)
-4.7
-0.6
N.D.
N.D.
-0.5
nitrogen source
L-Isoleucine (N)
-3.4
-2.3
N.D.
N.D.
+0.3
carbon source
L-Malic (C)
-3.6
-0.7
N.D.
N.D.
-0.6
stress
3-octanone 5.2896 mM
-1.2
-0.5
N.D.
N.D.
-3.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.9
-1.0
N.D.
N.D.
-1.6
stress
3-octanone 5.2896 mM
-2.9
+0.2
N.D.
N.D.
-1.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-3.4
+0.7
N.D.
N.D.
-1.8
carbon source
D,L-Lactate (C)
-2.6
-1.4
N.D.
N.D.
-0.4
carbon source
D-Fructose (C)
-3.7
+0.0
N.D.
N.D.
-0.7
stress
3-octanone 6.3476 mM
-2.8
+1.3
N.D.
N.D.
-2.7
motility
outer cut, LB soft agar motility assay
-2.5
-2.5
N.D.
N.D.
+0.7
carbon source
succinate (C)
-4.1
+0.1
N.D.
N.D.
-0.3
nitrogen source
Ammonium chloride (N)
-3.8
-0.2
N.D.
N.D.
-0.2
stress
2-pentyl-furan 1.335528 mM
-2.7
-1.2
N.D.
N.D.
-0.3
carbon source
D,L-Lactate (C)
-4.0
-0.1
N.D.
N.D.
+0.0
carbon source
L-Malic (C)
-4.1
+0.3
N.D.
N.D.
-0.1
nitrogen source
Urea (N)
-4.0
+0.1
N.D.
N.D.
+0.4
motility
inner cut, LB soft agar motility assay
-4.5
+0.7
N.D.
N.D.
+0.3
stress
3-octanone 6.3476 mM
-0.3
+0.7
N.D.
N.D.
-3.8
stress
2-pentyl-furan 1.335528 mM
-2.9
+0.2
N.D.
N.D.
-0.7
motility
inner cut, LB soft agar motility assay
-2.0
-1.7
N.D.
N.D.
+0.5
nitrogen source
Urea (N)
-2.5
-1.0
N.D.
N.D.
+0.4
stress
2-Furfuraldehyde 0.2 vol%
-4.1
+1.2
N.D.
N.D.
-0.1
stress
Cobalt chloride 0.3 mM
-3.2
+0.5
N.D.
N.D.
-0.1
lb no stress control
LB no stress control
-2.9
+0.8
N.D.
N.D.
-0.2
carbon source
Glycerol (C)
-3.3
-0.4
N.D.
N.D.
+2.3
stress
3-octanone 6.3476 mM
+0.8
+0.5
N.D.
N.D.
-2.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+3.5
-0.5
N.D.
N.D.
-1.1
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