Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS15910 and AZOBR_RS15915 are separated by 164 nucleotidesAZOBR_RS15915 and AZOBR_RS15920 are separated by 30 nucleotidesAZOBR_RS15920 and AZOBR_RS15925 are separated by 82 nucleotidesAZOBR_RS15925 and AZOBR_RS15930 are separated by 458 nucleotides AZOBR_RS15910: AZOBR_RS15910 - hypothetical protein, at 322,747 to 324,030 _RS15910 AZOBR_RS15915: AZOBR_RS15915 - gluconate TRAP transporter, periplasmic solute-binding component (from data), at 324,195 to 325,208 _RS15915 AZOBR_RS15920: AZOBR_RS15920 - Large component of TRAP-type D-gluconate transporter (from data), at 325,239 to 326,519 _RS15920 AZOBR_RS15925: AZOBR_RS15925 - gluconate TRAP transporter, small permease component (from data), at 326,602 to 327,093 _RS15925 AZOBR_RS15930: AZOBR_RS15930 - transcriptional regulator, at 327,552 to 328,394 _RS15930
Group Condition AZOBR_RS15910 AZOBR_RS15915 AZOBR_RS15920 AZOBR_RS15925 AZOBR_RS15930
carbon source D-Gluconic Acid (C) +0.0 -2.7 -2.9 -1.8 N.D.
carbon source D-Gluconic Acid (C) +0.2 -2.4 -2.5 -2.6 N.D.
stress 3-octanone 6.3476 mM -0.4 -1.2 -0.2 -0.0 N.D.
stress Bacitracin 0.25 mg/ml -1.6 -0.1 -0.0 +0.0 N.D.
stress D-Cycloserine 0.125 mg/ml -0.3 -0.5 -0.6 -0.0 N.D.
stress Vancomycin 0.03 mg/ml -1.3 -0.0 -0.1 -0.0 N.D.
stress 3-octanone 5.2896 mM -0.2 -0.6 -0.2 -0.3 N.D.
lb no stress control LB no stress control +0.1 -0.1 -0.0 -1.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.2 -0.3 -0.9 N.D.
stress 3-octanone 6.3476 mM -0.3 -0.7 +0.0 -0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.1 -0.2 -1.3 N.D.
motility inner cut, LB soft agar motility assay -0.8 +0.0 +0.4 -0.6 N.D.
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.5 +0.2 -0.2 -0.4 N.D.
nitrogen source L-Isoleucine (N) -0.3 -0.2 +0.4 -0.5 N.D.
nitrogen source casaminos (N) -0.2 -0.7 -0.0 +0.3 N.D.
lb LB -0.2 -0.5 +0.4 -0.3 N.D.
nitrogen source Cytosine (N) -0.2 -0.4 -0.2 +0.3 N.D.
stress 3-octanone 5.2896 mM -0.3 +0.4 +0.1 -0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 -0.2 -0.2 -0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +0.1 -0.4 -0.9 N.D.
stress 3-octanone 4.2317 mM -0.3 -0.4 +0.1 +0.5 N.D.
stress 2-pentyl-furan 1.780666667 mM -0.4 -0.2 +0.0 +0.7 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.3 -0.4 +0.3 -0.2 N.D.
stress 2-Furfuraldehyde 0.2 vol% -0.5 +0.3 -0.1 +0.6 N.D.
stress 3-octanone 6.3476 mM -0.6 +0.1 +0.2 +0.7 N.D.
motility outer cut, LB soft agar motility assay +0.3 +0.3 +0.3 -0.4 N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.5 +0.5 +0.4 +0.2 N.D.
stress Benzethonium chloride 0.003 mM +0.9 -0.5 +0.0 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 -0.6 -0.2 +0.5 N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3 +0.7 +0.4 +0.6 N.D.
remove
AZOBR_RS15910
plot		 remove
AZOBR_RS15915
plot		 remove
AZOBR_RS15920		 remove
AZOBR_RS15925
plot		 remove
AZOBR_RS15930
plot