Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS15895 and AZOBR_RS15900 are separated by 172 nucleotidesAZOBR_RS15900 and AZOBR_RS15905 are separated by 156 nucleotidesAZOBR_RS15905 and AZOBR_RS15910 are separated by 32 nucleotidesAZOBR_RS15910 and AZOBR_RS15915 are separated by 164 nucleotides AZOBR_RS15895: AZOBR_RS15895 - hypothetical protein, at 320,854 to 321,075 _RS15895 AZOBR_RS15900: AZOBR_RS15900 - hypothetical protein, at 321,248 to 321,706 _RS15900 AZOBR_RS15905: AZOBR_RS15905 - 2-hydroxyhepta-2 4-diene-1 7-dioate isomerase, at 321,863 to 322,714 _RS15905 AZOBR_RS15910: AZOBR_RS15910 - hypothetical protein, at 322,747 to 324,030 _RS15910 AZOBR_RS15915: AZOBR_RS15915 - gluconate TRAP transporter, periplasmic solute-binding component (from data), at 324,195 to 325,208 _RS15915
Group Condition AZOBR_RS15895 AZOBR_RS15900 AZOBR_RS15905 AZOBR_RS15910 AZOBR_RS15915
carbon source D-Gluconic Acid (C) +0.1 -2.1 -0.9 +0.0 -2.7
stress Sisomicin 0.01 mg/ml -0.4 -2.8 +0.1 -0.1 -0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.5 -2.9 -0.7 +0.2 -0.1
stress Paraquat dichloride 0.04 mg/ml +0.1 -2.2 -0.3 +0.1 -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.1 -0.5 -1.0 +0.3 -0.4
stress Bacitracin 0.25 mg/ml -0.4 +0.6 -1.0 -1.6 -0.1
carbon source a-Ketoglutaric (C) -0.7 -1.8 +0.1 -0.1 +0.1
carbon source D-Gluconic Acid (C) -0.2 +0.0 +0.1 +0.2 -2.4
nitrogen source Cytosine (N) -0.6 -1.0 +0.3 -0.2 -0.4
stress 3-octanone 6.3476 mM +0.4 -0.8 +0.1 -0.4 -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -0.8 +0.4 +0.0 -0.7
stress Paraquat dichloride 0.02 mg/ml -1.4 -0.6 -0.0 -0.2 +0.4
nitrogen source L-Serine (N) -0.1 -1.9 +0.3 +0.4 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -2.3 +0.5 +0.9 -0.6
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.5 -0.8 -0.5 -0.3 +0.7
lb LB +0.9 -0.5 -0.8 -0.2 -0.5
lb LB -0.1 -1.5 -0.6 +0.3 +0.9
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 -1.2 -0.3 -0.2 +0.4
nitrogen source casaminos (N) -0.8 -0.8 +0.7 +0.3 -0.3
stress 2-Furfuraldehyde 0.2 vol% +0.4 -1.2 +0.2 -0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -1.9 +0.4 +1.0 +0.1
stress 2-pentyl-furan 2.671 mM +0.4 -1.0 +0.7 +0.1 -0.5
stress 2-pentyl-furan 1.780666667 mM +0.3 +0.8 -0.8 -0.5 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -1.2 +0.2 +0.9 -0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.3 +1.7 -0.8 +0.0 -0.2
stress D-Cycloserine 0.125 mg/ml +0.2 +0.7 +0.8 -0.3 -0.5
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.2 +1.1 -0.4 -0.5 +0.5
motility inner cut, LB soft agar motility assay -0.2 +1.1 -0.4 -0.1 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +1.2 +0.8 +0.2 -0.2
stress Benzethonium chloride 0.003 mM +0.4 +0.7 +0.7 +0.9 -0.5
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