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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS15750 and AZOBR_RS15760 are separated by 753 nucleotides
AZOBR_RS15760 and AZOBR_RS15765 overlap by 4 nucleotides
AZOBR_RS15765 and AZOBR_RS15770 are separated by 17 nucleotides
AZOBR_RS15770 and AZOBR_RS15775 are separated by 170 nucleotides
AZOBR_RS15750: AZOBR_RS15750 - hypothetical protein, at 284,905 to 285,792
_RS15750
AZOBR_RS15760: AZOBR_RS15760 - ATP-binding protein, at 286,546 to 287,484
_RS15760
AZOBR_RS15765: AZOBR_RS15765 - osmoprotectant uptake system permease, at 287,481 to 288,653
_RS15765
AZOBR_RS15770: AZOBR_RS15770 - osmoprotectant uptake system substrate-binding protein, at 288,671 to 289,591
_RS15770
AZOBR_RS15775: AZOBR_RS15775 - ferrochelatase, at 289,762 to 290,811
_RS15775
Group
Condition
AZOBR
_RS15750
AZOBR
_RS15760
AZOBR
_RS15765
AZOBR
_RS15770
AZOBR
_RS15775
stress
3-octanone 6.3476 mM
-0.0
-2.1
-0.4
-0.4
N.D.
stress
3-octanone 5.2896 mM
-0.7
-1.5
-0.7
+0.0
N.D.
stress
1-octen-3-ol 0.6784116667 mM
+0.1
-2.0
-0.0
-0.7
N.D.
stress
1-octen-3-ol 0.6784116667 mM
-0.1
-2.1
-0.1
-0.3
N.D.
lb
LB
-0.1
-2.2
-0.4
+0.1
N.D.
nitrogen source
L-Threonine (N)
-0.0
-3.5
+0.8
+0.3
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
+0.1
-2.2
-0.3
-0.0
N.D.
lb no stress control
LB no stress control
-0.2
-1.4
-0.3
-0.5
N.D.
stress
D-Cycloserine 0.125 mg/ml
-0.2
-2.6
+0.2
+0.4
N.D.
nitrogen source
casaminos (N)
-0.2
-1.4
-0.3
-0.2
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-0.0
-1.5
-0.5
-0.1
N.D.
stress
2-pentyl-furan 1.335528 mM
+0.1
-1.4
-0.2
-0.4
N.D.
stress
1-octen-3-ol 0.6030326667 mM
-0.2
-1.4
-0.3
-0.0
N.D.
stress
2-pentyl-furan 1.335528 mM
-0.0
-1.0
-0.5
-0.4
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
+0.2
-1.4
-0.5
-0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.8
-0.6
-0.2
N.D.
stress
3-octanone 6.3476 mM
-0.3
-1.1
-0.4
+0.1
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
+0.2
-1.7
-0.2
+0.0
N.D.
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
+0.1
-1.3
-0.3
+0.1
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
+0.3
-1.2
-0.3
+0.0
N.D.
stress
3-octanone 5.2896 mM
+0.2
-0.7
-0.5
-0.2
N.D.
stress
Chlorite 1 mM
+0.1
-1.4
+0.0
+0.2
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
+0.4
-1.3
-0.1
-0.2
N.D.
motility
inner cut, LB soft agar motility assay
+0.4
-1.0
-0.1
-0.4
N.D.
nitrogen source
L-Aspartic Acid (N)
+0.0
-1.5
+0.4
+0.1
N.D.
nitrogen source
L-Glutamic (N)
+0.4
+0.6
-1.3
+0.2
N.D.
stress
2-pentyl-furan 1.780666667 mM
-0.5
+0.9
-0.6
+0.2
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
-0.8
-0.0
+1.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.6
-0.6
+0.4
N.D.
stress
2-pentyl-furan 1.780666667 mM
-0.1
+2.0
-0.2
-0.7
N.D.
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