Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS15615 and AZOBR_RS15620 are separated by 129 nucleotidesAZOBR_RS15620 and AZOBR_RS15625 are separated by 240 nucleotidesAZOBR_RS15625 and AZOBR_RS15630 are separated by 396 nucleotidesAZOBR_RS15630 and AZOBR_RS15635 are separated by 415 nucleotides AZOBR_RS15615: AZOBR_RS15615 - ABC transporter substrate-binding protein, at 259,876 to 261,084 _RS15615 AZOBR_RS15620: AZOBR_RS15620 - GntR family transcriptional regulator, at 261,214 to 262,008 _RS15620 AZOBR_RS15625: AZOBR_RS15625 - deoxycytidine triphosphate deaminase, at 262,249 to 262,833 _RS15625 AZOBR_RS15630: AZOBR_RS15630 - hypothetical protein, at 263,230 to 263,463 _RS15630 AZOBR_RS15635: AZOBR_RS15635 - hypothetical protein, at 263,879 to 264,283 _RS15635
Group Condition AZOBR_RS15615 AZOBR_RS15620 AZOBR_RS15625 AZOBR_RS15630 AZOBR_RS15635
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 -0.3 N.D. N.D. -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.4 N.D. N.D. -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.6 N.D. N.D. +0.3
stress Paraquat dichloride 0.02 mg/ml -0.6 -1.0 N.D. N.D. -0.2
stress 2-pentyl-furan 2.671 mM -0.8 -1.0 N.D. N.D. +0.3
nitrogen source L-Leucine (N) -0.3 -0.7 N.D. N.D. -0.4
stress 2-pentyl-furan 1.335528 mM -0.2 -0.8 N.D. N.D. -0.4
stress 2-pentyl-furan 1.335528 mM -0.7 -0.6 N.D. N.D. +0.0
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.2 -0.5 N.D. N.D. -0.8
stress 2-pentyl-furan 1.780666667 mM -0.7 -0.5 N.D. N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -1.1 N.D. N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.7 N.D. N.D. -0.4
lb LB -0.3 -0.9 N.D. N.D. +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +0.0 N.D. N.D. -1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -1.1 N.D. N.D. +0.5
stress 3-octanone 6.3476 mM +0.3 -0.6 N.D. N.D. -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.5 -0.3 N.D. N.D. -0.5
nitrogen source L-Isoleucine (N) -0.7 +0.4 N.D. N.D. +0.1
stress Benzethonium chloride 0.003 mM +0.1 -0.6 N.D. N.D. +0.6
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.0 +0.8 N.D. N.D. -0.4
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.2 +0.9 N.D. N.D. +0.2
nitrogen source Ammonium chloride (N) +0.6 -0.1 N.D. N.D. +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +1.3 N.D. N.D. +0.0
carbon source D-Lactate (C) +0.3 +0.5 N.D. N.D. +0.3
carbon source D,L-Lactate (C) +0.2 +0.8 N.D. N.D. +0.1
carbon source Ethanol (C) +0.3 +0.6 N.D. N.D. +0.2
nitrogen source L-Threonine (N) +0.2 +0.7 N.D. N.D. +0.4
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days +0.1 +1.1 N.D. N.D. +0.1
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.1 +1.1 N.D. N.D. +0.3
nitrogen source casaminos (N) +0.4 +0.7 N.D. N.D. +0.5
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