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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS15320 and AZOBR_RS15325 are separated by 199 nucleotides
AZOBR_RS15325 and AZOBR_RS15330 are separated by 194 nucleotides
AZOBR_RS15330 and AZOBR_RS15335 are separated by 41 nucleotides
AZOBR_RS15335 and AZOBR_RS15340 are separated by 256 nucleotides
AZOBR_RS15320: AZOBR_RS15320 - DNA gyrase subunit A, at 200,066 to 202,903
_RS15320
AZOBR_RS15325: AZOBR_RS15325 - multidrug transporter, at 203,103 to 204,482
_RS15325
AZOBR_RS15330: AZOBR_RS15330 - entericidin EcnAB, at 204,677 to 204,829
_RS15330
AZOBR_RS15335: AZOBR_RS15335 - hypothetical protein, at 204,871 to 205,059
_RS15335
AZOBR_RS15340: AZOBR_RS15340 - hypothetical protein, at 205,316 to 205,942
_RS15340
Group
Condition
AZOBR
_RS15320
AZOBR
_RS15325
AZOBR
_RS15330
AZOBR
_RS15335
AZOBR
_RS15340
stress
Sisomicin 0.01 mg/ml
N.D.
-1.0
N.D.
N.D.
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.6
N.D.
N.D.
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.7
N.D.
N.D.
-0.4
motility
inner cut, LB soft agar motility assay
N.D.
-0.8
N.D.
N.D.
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.7
N.D.
N.D.
-0.3
stress
Paraquat dichloride 0.04 mg/ml
N.D.
-0.3
N.D.
N.D.
-0.6
stress
3-octanone 6.3476 mM
N.D.
+0.1
N.D.
N.D.
-0.9
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.1
N.D.
N.D.
-0.7
nitrogen source
casaminos (N)
N.D.
-0.3
N.D.
N.D.
-0.5
nitrogen source
L-Glutamic (N)
N.D.
+0.1
N.D.
N.D.
-0.8
stress
Cobalt chloride 0.3 mM
N.D.
-0.1
N.D.
N.D.
-0.6
stress
2-pentyl-furan 1.335528 mM
N.D.
+0.0
N.D.
N.D.
-0.6
stress
3-octanone 6.3476 mM
N.D.
-0.2
N.D.
N.D.
-0.4
nitrogen source
L-Isoleucine (N)
N.D.
+0.0
N.D.
N.D.
-0.6
lb
LB
N.D.
-0.3
N.D.
N.D.
-0.3
carbon source
D-Gluconic Acid (C)
N.D.
-0.3
N.D.
N.D.
-0.3
lb
LB
N.D.
-0.2
N.D.
N.D.
-0.3
stress
3-octanone 5.2896 mM
N.D.
-0.1
N.D.
N.D.
-0.5
stress
2-pentyl-furan 1.335528 mM
N.D.
+0.1
N.D.
N.D.
-0.6
motility
outer cut, LB soft agar motility assay
N.D.
-0.6
N.D.
N.D.
+0.2
motility
inner cut, LB soft agar motility assay
N.D.
-0.8
N.D.
N.D.
+0.4
dmso control
DMSO control
N.D.
+0.2
N.D.
N.D.
-0.4
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
N.D.
+0.2
N.D.
N.D.
-0.4
nitrogen source
Glucuronamide (N)
N.D.
+0.4
N.D.
N.D.
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.5
N.D.
N.D.
+0.6
stress
2-pentyl-furan 1.335528 mM
N.D.
-0.2
N.D.
N.D.
+0.4
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
N.D.
-0.1
N.D.
N.D.
+0.5
nitrogen source
L-Asparagine (N)
N.D.
+0.1
N.D.
N.D.
+0.5
nitrogen source
Cytosine (N)
N.D.
+0.3
N.D.
N.D.
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.2
N.D.
N.D.
+1.1
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