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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS14065 and AZOBR_RS14070 are separated by 1 nucleotides
AZOBR_RS14070 and AZOBR_RS14075 are separated by 148 nucleotides
AZOBR_RS14075 and AZOBR_RS14080 are separated by 42 nucleotides
AZOBR_RS14080 and AZOBR_RS14085 are separated by 138 nucleotides
AZOBR_RS14065: AZOBR_RS14065 - malate--CoA ligase subunit beta, at 2,955,544 to 2,956,740
_RS14065
AZOBR_RS14070: AZOBR_RS14070 - succinyl-CoA synthetase subsunit alpha, at 2,956,742 to 2,957,617
_RS14070
AZOBR_RS14075: AZOBR_RS14075 - MFS transporter, at 2,957,766 to 2,960,690
_RS14075
AZOBR_RS14080: AZOBR_RS14080 - dihydrolipoamide succinyltransferase, at 2,960,733 to 2,961,986
_RS14080
AZOBR_RS14085: AZOBR_RS14085 - histidine kinase, at 2,962,125 to 2,963,318
_RS14085
Group
Condition
AZOBR
_RS14065
AZOBR
_RS14070
AZOBR
_RS14075
AZOBR
_RS14080
AZOBR
_RS14085
stress
3-octanone 6.3476 mM
-0.9
-0.7
N.D.
N.D.
N.D.
stress
2-pentyl-furan 1.335528 mM
-1.0
-0.5
N.D.
N.D.
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-0.8
-0.5
N.D.
N.D.
N.D.
stress
3-octanone 5.2896 mM
-0.4
-0.7
N.D.
N.D.
N.D.
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
-0.6
-0.4
N.D.
N.D.
N.D.
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
-0.5
-0.4
N.D.
N.D.
N.D.
nitrogen source
L-Threonine (N)
+0.2
-1.0
N.D.
N.D.
N.D.
stress
2-pentyl-furan 2.671 mM
+0.1
-0.9
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.6
+0.4
N.D.
N.D.
N.D.
stress
2-pentyl-furan 1.780666667 mM
+0.5
-0.5
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.9
N.D.
N.D.
N.D.
stress
Benzethonium chloride 0.003 mM
-0.1
+0.9
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
+0.3
+0.6
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
+0.2
+0.7
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.2 mM
+0.6
+0.3
N.D.
N.D.
N.D.
lb
LB
+0.7
+0.2
N.D.
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
+0.7
+0.2
N.D.
N.D.
N.D.
nitrogen source
casaminos (N)
+0.4
+0.5
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
+0.3
+0.7
N.D.
N.D.
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.2
+0.7
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.9
N.D.
N.D.
N.D.
stress
Chlorite 1 mM
+0.2
+0.8
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
+0.2
+0.8
N.D.
N.D.
N.D.
nitrogen source
nitrate (N)
+0.6
+0.4
N.D.
N.D.
N.D.
nitrogen source
D-Alanine (N)
+0.2
+0.8
N.D.
N.D.
N.D.
stress
Bacitracin 0.25 mg/ml
+0.6
+0.5
N.D.
N.D.
N.D.
nitrogen source
Urea (N)
+0.5
+0.6
N.D.
N.D.
N.D.
nitrogen source
L-Citrulline (N)
+0.5
+0.7
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.8
N.D.
N.D.
N.D.
stress
Sisomicin 0.01 mg/ml
+0.7
+0.9
N.D.
N.D.
N.D.
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