Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS12015 and AZOBR_RS12020 are separated by 20 nucleotidesAZOBR_RS12020 and AZOBR_RS12025 are separated by 23 nucleotidesAZOBR_RS12025 and AZOBR_RS12030 are separated by 126 nucleotidesAZOBR_RS12030 and AZOBR_RS12035 are separated by 36 nucleotides AZOBR_RS12015: AZOBR_RS12015 - acetyl-CoA carboxylase biotin carboxylase subunit, at 2,525,186 to 2,526,529 _RS12015 AZOBR_RS12020: AZOBR_RS12020 - acetyl-CoA carboxylase, at 2,526,550 to 2,526,999 _RS12020 AZOBR_RS12025: AZOBR_RS12025 - 3-dehydroquinate dehydratase, at 2,527,023 to 2,527,472 _RS12025 AZOBR_RS12030: AZOBR_RS12030 - amino acid ABC transporter substrate-binding protein, at 2,527,599 to 2,528,378 _RS12030 AZOBR_RS12035: AZOBR_RS12035 - hypothetical protein, at 2,528,415 to 2,529,878 _RS12035
Group Condition AZOBR_RS12015 AZOBR_RS12020 AZOBR_RS12025 AZOBR_RS12030 AZOBR_RS12035
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. -0.4 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -0.5 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -0.7 -0.1
stress 2-pentyl-furan 2.671 mM N.D. N.D. N.D. -0.6 -0.1
lb LB N.D. N.D. N.D. -0.6 -0.1
stress 3-octanone 6.3476 mM N.D. N.D. N.D. -0.6 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. -0.3 -0.3
stress Paraquat dichloride 0.02 mg/ml N.D. N.D. N.D. -0.5 -0.1
stress 3-octanone 6.3476 mM N.D. N.D. N.D. -0.4 -0.2
nitrogen source L-Histidine (N) N.D. N.D. N.D. -0.3 -0.2
stress 3-octanone 4.2317 mM N.D. N.D. N.D. -0.2 -0.3
stress 2-pentyl-furan 1.780666667 mM N.D. N.D. N.D. -0.5 +0.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. N.D. -0.4 +0.1
motility inner cut, LB soft agar motility assay N.D. N.D. N.D. +0.3 -0.3
stress Cobalt chloride 0.2 mM N.D. N.D. N.D. -0.3 +0.2
nitrogen source L-Leucine (N) N.D. N.D. N.D. -0.4 +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. N.D. -0.2 +0.3
stress 2-pentyl-furan 1.780666667 mM N.D. N.D. N.D. +0.4 -0.1
motility outer cut, LB soft agar motility assay N.D. N.D. N.D. +0.4 -0.0
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days N.D. N.D. N.D. +0.1 +0.4
carbon source pyruvate (C) N.D. N.D. N.D. +0.2 +0.3
nitrogen source L-Phenylalanine (N) N.D. N.D. N.D. +0.3 +0.2
carbon source D-Gluconic Acid (C) N.D. N.D. N.D. +0.1 +0.4
nitrogen source L-Threonine (N) N.D. N.D. N.D. +0.1 +0.4
carbon source L-Malic (C) N.D. N.D. N.D. +0.4 +0.1
stress Benzethonium chloride 0.003 mM N.D. N.D. N.D. +0.3 +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. N.D. +0.5 +0.2
stress 3-octanone 6.3476 mM N.D. N.D. N.D. +0.5 +0.3
carbon source a-Ketoglutaric (C) N.D. N.D. N.D. +0.5 +0.3
carbon source a-Ketoglutaric (C) N.D. N.D. N.D. +0.5 +0.4
remove
AZOBR_RS12015
plot		 remove
AZOBR_RS12020
plot		 remove
AZOBR_RS12025		 remove
AZOBR_RS12030
plot		 remove
AZOBR_RS12035
plot