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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS11335 and AZOBR_RS11340 are separated by 10 nucleotides
AZOBR_RS11340 and AZOBR_RS11345 are separated by 172 nucleotides
AZOBR_RS11345 and AZOBR_RS11350 are separated by 6 nucleotides
AZOBR_RS11350 and AZOBR_RS11355 are separated by 231 nucleotides
AZOBR_RS11335: AZOBR_RS11335 - alpha/beta hydrolase, at 2,382,142 to 2,382,939
_RS11335
AZOBR_RS11340: AZOBR_RS11340 - O-acetylhomoserine aminocarboxypropyltransferase, at 2,382,950 to 2,384,260
_RS11340
AZOBR_RS11345: AZOBR_RS11345 - carboxylate-amine ligase, at 2,384,433 to 2,385,563
_RS11345
AZOBR_RS11350: AZOBR_RS11350 - N-formylglutamate amidohydrolase, at 2,385,570 to 2,386,397
_RS11350
AZOBR_RS11355: AZOBR_RS11355 - membrane protein, at 2,386,629 to 2,387,543
_RS11355
Group
Condition
AZOBR
_RS11335
AZOBR
_RS11340
AZOBR
_RS11345
AZOBR
_RS11350
AZOBR
_RS11355
motility
outer cut, LB soft agar motility assay
-0.9
-0.0
+0.3
-1.7
-0.9
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
-0.3
-0.0
-0.7
-0.9
-0.4
carbon source
D-Gluconic Acid (C)
-0.0
-0.2
+0.0
-1.7
-0.2
nitrogen source
Parabanic Acid (N)
+0.0
+0.3
-0.2
-1.8
-0.5
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-0.2
-0.2
-0.3
-0.7
-0.4
stress
2-pentyl-furan 1.335528 mM
-0.3
-0.3
-0.7
-0.6
+0.2
carbon source
D-Gluconic Acid (C)
+0.1
+0.3
+0.4
-1.9
-0.5
stress
2-pentyl-furan 1.780666667 mM
-0.2
+0.4
-0.5
-1.1
-0.2
stress
2-pentyl-furan 1.335528 mM
+0.3
-0.2
-0.3
-0.7
-0.3
stress
Benzethonium chloride 0.003 mM
-0.3
-0.1
+0.6
-0.7
-0.4
stress
2-pentyl-furan 1.780666667 mM
+0.5
+0.2
-0.6
-1.0
+0.0
stress
2-pentyl-furan 1.335528 mM
+0.3
-0.7
-0.6
+0.4
-0.0
nitrogen source
Parabanic Acid (N)
+0.3
+0.2
+0.3
-1.4
+0.1
carbon source
Ethanol (C)
-0.3
+0.1
-0.4
+0.6
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
+0.3
-0.5
+0.5
-0.7
anaerobic; rich media
LB; anaerobic
-0.1
+0.3
-0.5
+0.7
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.2
+0.5
+1.0
-0.6
nitrogen source
L-Glutamic (N)
+0.2
+0.3
+0.5
-0.5
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.0
+0.3
+1.5
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.7
+0.0
+0.4
+0.6
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.3
+0.4
+0.7
-0.6
motility
inner cut, LB soft agar motility assay
-0.0
+0.3
-0.0
+1.4
-0.5
lb
LB
+0.5
+0.4
-0.5
+0.2
+0.8
nitrogen source
L-Isoleucine (N)
+0.6
-0.4
+0.7
+0.7
-0.3
motility
inner cut, LB soft agar motility assay
-0.1
+0.2
+0.6
+0.0
+1.3
nitrogen source
L-Leucine (N)
+0.6
+0.2
+0.8
+0.6
-0.1
stress
Cobalt chloride 0.3 mM
+0.3
+0.3
+0.4
+0.1
+1.1
stress
Cobalt chloride 0.2 mM
-0.2
+0.8
+0.3
+0.2
+1.1
stress
Sisomicin 0.01 mg/ml
+0.2
+0.5
+0.2
+0.6
+0.9
stress
Paraquat dichloride 0.04 mg/ml
+0.3
+0.2
-0.0
+0.5
+1.7
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