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Gene
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Cofit
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS11065 and AZOBR_RS11080 are separated by 2948 nucleotides
AZOBR_RS11080 and AZOBR_RS11085 are separated by 116 nucleotides
AZOBR_RS11085 and AZOBR_RS11090 are separated by 104 nucleotides
AZOBR_RS11090 and AZOBR_RS11095 are separated by 447 nucleotides
AZOBR_RS11065: AZOBR_RS11065 - permease, at 2,328,002 to 2,328,499
_RS11065
AZOBR_RS11080: AZOBR_RS11080 - ATPase AAA, at 2,331,448 to 2,332,293
_RS11080
AZOBR_RS11085: AZOBR_RS11085 - hypothetical protein, at 2,332,410 to 2,332,727
_RS11085
AZOBR_RS11090: AZOBR_RS11090 - alanyl-tRNA synthetase, at 2,332,832 to 2,335,501
_RS11090
AZOBR_RS11095: AZOBR_RS11095 - recombinase RecA, at 2,335,949 to 2,337,028
_RS11095
Group
Condition
AZOBR
_RS11065
AZOBR
_RS11080
AZOBR
_RS11085
AZOBR
_RS11090
AZOBR
_RS11095
stress
Nickel (II) chloride 0.5 mM
+0.0
-0.1
N.D.
N.D.
-5.1
lb
LB
+0.0
-0.1
N.D.
N.D.
-4.9
stress
Chlorite 1 mM
-0.4
-0.1
N.D.
N.D.
-4.4
stress
benzoic 0.29 mg/ml
+0.2
-0.1
N.D.
N.D.
-4.9
lb
LB
-0.0
+0.2
N.D.
N.D.
-4.9
stress
Thallium(I) acetate 0.008 mg/ml
+0.3
+0.0
N.D.
N.D.
-5.0
stress
Aluminum chloride 5 mM
+0.1
+0.2
N.D.
N.D.
-5.0
stress
Bacitracin 0.25 mg/ml
+0.1
+0.2
N.D.
N.D.
-5.0
stress
nitrite 10 mM
+0.1
+0.2
N.D.
N.D.
-4.8
lb
LB
-0.2
+0.2
N.D.
N.D.
-4.4
stress
Benzethonium chloride 0.003 mM
+0.2
+0.2
N.D.
N.D.
-4.8
stress
benzoic 0.145 mg/ml
+0.2
+0.2
N.D.
N.D.
-4.9
motility
inner cut, LB soft agar motility assay
-0.7
+0.3
N.D.
N.D.
-4.0
stress
Cobalt chloride 0.3 mM
-0.1
-0.1
N.D.
N.D.
-4.1
motility
outer cut, LB soft agar motility assay
-0.1
-0.2
N.D.
N.D.
-3.9
stress
Paraquat dichloride 0.02 mg/ml
+0.3
+0.1
N.D.
N.D.
-4.4
stress
Paraquat dichloride 0.04 mg/ml
+0.4
-0.3
N.D.
N.D.
-4.2
stress
Cobalt chloride 0.2 mM
-0.0
+0.3
N.D.
N.D.
-4.2
stress
nitrate 100 mM
+0.0
+0.1
N.D.
N.D.
-4.0
stress
Sisomicin 0.01 mg/ml
+0.2
+0.3
N.D.
N.D.
-4.4
carbon source
a-Ketoglutaric (C)
-0.0
+0.3
N.D.
N.D.
-4.1
stress
D-Cycloserine 0.125 mg/ml
+0.9
-0.0
N.D.
N.D.
-4.8
motility
inner cut, LB soft agar motility assay
-0.2
-0.0
N.D.
N.D.
-3.6
lb
LB
+0.0
+0.3
N.D.
N.D.
-4.1
motility
inner cut, LB soft agar motility assay
+0.5
-0.3
N.D.
N.D.
-3.9
stress
Vancomycin 0.03 mg/ml
+0.1
+0.0
N.D.
N.D.
-3.7
nitrogen source
L-Histidine (N)
+0.3
-0.2
N.D.
N.D.
-3.7
nitrogen source
casaminos (N)
-0.0
-0.0
N.D.
N.D.
-3.5
nitrogen source
D-Alanine (N)
+0.2
-0.0
N.D.
N.D.
-3.7
nitrogen source
L-Isoleucine (N)
-0.4
+0.2
N.D.
N.D.
-2.9
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