Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS11055 and AZOBR_RS11060 are separated by 108 nucleotidesAZOBR_RS11060 and AZOBR_RS11065 are separated by 43 nucleotidesAZOBR_RS11065 and AZOBR_RS11080 are separated by 2948 nucleotidesAZOBR_RS11080 and AZOBR_RS11085 are separated by 116 nucleotides AZOBR_RS11055: AZOBR_RS11055 - phosphohydrolase, at 2,325,832 to 2,326,383 _RS11055 AZOBR_RS11060: AZOBR_RS11060 - (Fe-S)-binding protein, at 2,326,492 to 2,327,958 _RS11060 AZOBR_RS11065: AZOBR_RS11065 - permease, at 2,328,002 to 2,328,499 _RS11065 AZOBR_RS11080: AZOBR_RS11080 - ATPase AAA, at 2,331,448 to 2,332,293 _RS11080 AZOBR_RS11085: AZOBR_RS11085 - hypothetical protein, at 2,332,410 to 2,332,727 _RS11085
Group Condition AZOBR_RS11055 AZOBR_RS11060 AZOBR_RS11065 AZOBR_RS11080 AZOBR_RS11085
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.3 -0.5 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -0.1 -0.2 -0.1 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -0.3 -0.4 +0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.1 -0.5 -0.5 N.D.
motility inner cut, LB soft agar motility assay -0.7 -0.0 -0.2 -0.0 N.D.
carbon source D-Gluconic Acid (C) -1.1 -0.1 +0.1 +0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 +0.2 +0.1 +0.1 N.D.
nitrogen source L-Isoleucine (N) -0.6 +0.1 -0.4 +0.2 N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 +0.0 -0.1 -0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -0.0 +0.4 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.2 -0.0 +0.1 N.D.
motility inner cut, LB soft agar motility assay -0.3 +0.1 -0.7 +0.3 N.D.
nitrogen source casaminos (N) -0.7 +0.2 -0.0 -0.0 N.D.
stress 2-pentyl-furan 1.335528 mM -0.7 +0.2 +0.0 -0.0 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.3 -0.1 -0.4 -0.2 N.D.
stress Paraquat dichloride 0.04 mg/ml -0.4 -0.0 +0.4 -0.3 N.D.
stress Chlorite 1 mM +0.4 +0.0 -0.4 -0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.1 -0.1 -0.4 N.D.
stress 2-pentyl-furan 1.780666667 mM -0.2 +0.1 -0.2 +0.3 N.D.
stress benzoic 0.145 mg/ml -0.3 +0.1 +0.2 +0.2 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +0.0 -0.3 +0.1 N.D.
stress benzoic 0.29 mg/ml +0.4 -0.1 +0.2 -0.1 N.D.
motility inner cut, LB soft agar motility assay -0.0 +0.3 +0.5 -0.3 N.D.
stress 3-octanone 6.3476 mM +0.7 -0.1 +0.1 -0.1 N.D.
stress Cobalt chloride 0.3 mM +0.7 +0.1 -0.1 -0.1 N.D.
stress D-Cycloserine 0.125 mg/ml -0.0 -0.2 +0.9 -0.0 N.D.
lb LB +0.7 +0.2 -0.2 +0.2 N.D.
stress 3-octanone 6.3476 mM +0.6 -0.0 +0.4 +0.1 N.D.
stress Benzethonium chloride 0.003 mM +0.8 +0.1 +0.2 +0.2 N.D.
stress 3-octanone 6.3476 mM +0.9 +0.2 -0.1 +0.4 N.D.
remove
AZOBR_RS11055
plot		 remove
AZOBR_RS11060
plot		 remove
AZOBR_RS11065		 remove
AZOBR_RS11080
plot		 remove
AZOBR_RS11085
plot