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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS10720 and AZOBR_RS10725 are separated by 171 nucleotides
AZOBR_RS10725 and AZOBR_RS10730 are separated by 96 nucleotides
AZOBR_RS10730 and AZOBR_RS10735 are separated by 41 nucleotides
AZOBR_RS10735 and AZOBR_RS10740 are separated by 9 nucleotides
AZOBR_RS10720: AZOBR_RS10720 - enoyl-ACP reductase, at 2,252,421 to 2,253,269
_RS10720
AZOBR_RS10725: AZOBR_RS10725 - hypothetical protein, at 2,253,441 to 2,254,604
_RS10725
AZOBR_RS10730: AZOBR_RS10730 - chorismate synthase, at 2,254,701 to 2,255,777
_RS10730
AZOBR_RS10735: AZOBR_RS10735 - hypothetical protein, at 2,255,819 to 2,256,352
_RS10735
AZOBR_RS10740: AZOBR_RS10740 - regulator, at 2,256,362 to 2,257,456
_RS10740
Group
Condition
AZOBR
_RS10720
AZOBR
_RS10725
AZOBR
_RS10730
AZOBR
_RS10735
AZOBR
_RS10740
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.1
N.D.
-2.2
-0.5
stress
2-pentyl-furan 1.780666667 mM
N.D.
+0.1
N.D.
-2.4
+0.2
motility
inner cut, LB soft agar motility assay
N.D.
+0.1
N.D.
-2.2
+0.0
lb
LB
N.D.
+0.1
N.D.
-0.5
-0.8
stress
3-octanone 5.2896 mM
N.D.
-0.4
N.D.
-1.1
+0.3
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.2
N.D.
-0.8
-0.1
nitrogen source
L-Asparagine (N)
N.D.
-0.1
N.D.
-1.1
+0.1
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
-0.2
N.D.
-1.0
+0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
-0.1
N.D.
-1.0
+0.3
nitrogen source
L-Serine (N)
N.D.
-0.3
N.D.
-0.9
+0.4
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.2
N.D.
-1.2
+0.6
stress
3-octanone 5.2896 mM
N.D.
-0.3
N.D.
-0.7
+0.3
stress
2-pentyl-furan 2.671 mM
N.D.
-0.6
N.D.
-0.8
+0.9
stress
1-octen-3-ol 0.6784116667 mM
N.D.
-0.7
N.D.
+0.3
+0.2
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
-0.2
N.D.
-0.5
+0.5
stress
Benzethonium chloride 0.003 mM
N.D.
-0.6
N.D.
+0.2
+0.5
stress
2-pentyl-furan 1.335528 mM
N.D.
+0.4
N.D.
-0.8
+0.6
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
N.D.
+0.2
N.D.
+0.5
-0.5
motility
inner cut, LB soft agar motility assay
N.D.
-0.3
N.D.
+0.8
-0.2
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
N.D.
-0.1
N.D.
+0.8
-0.3
stress
Paraquat dichloride 0.04 mg/ml
N.D.
+0.2
N.D.
+0.8
-0.4
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
N.D.
+0.2
N.D.
+0.8
-0.3
nitrogen source
Parabanic Acid (N)
N.D.
-0.3
N.D.
+1.0
+0.3
nitrogen source
Cytosine (N)
N.D.
-0.0
N.D.
+0.7
+0.4
anaerobic; rich media
LB; anaerobic
N.D.
-0.1
N.D.
+1.2
+0.2
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
N.D.
+0.4
N.D.
+0.8
+0.1
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
N.D.
+0.3
N.D.
+0.9
+0.1
nitrogen source
L-Glutamic (N)
N.D.
+0.2
N.D.
+0.7
+0.5
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
N.D.
+0.1
N.D.
+0.9
+0.4
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
N.D.
+0.8
N.D.
+0.7
+0.2
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AZOBR_RS10730
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