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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS10570 and AZOBR_RS10575 are separated by 59 nucleotides
AZOBR_RS10575 and AZOBR_RS10580 are separated by 175 nucleotides
AZOBR_RS10580 and AZOBR_RS10585 are separated by 67 nucleotides
AZOBR_RS10585 and AZOBR_RS10590 are separated by 66 nucleotides
AZOBR_RS10570: AZOBR_RS10570 - cytochrome B562, at 2,218,285 to 2,219,163
_RS10570
AZOBR_RS10575: AZOBR_RS10575 - cytochrome C oxidase assembly protein, at 2,219,223 to 2,219,846
_RS10575
AZOBR_RS10580: AZOBR_RS10580 - protoheme IX farnesyltransferase, at 2,220,022 to 2,220,951
_RS10580
AZOBR_RS10585: AZOBR_RS10585 - cytochrome C oxidase subunit I, at 2,221,019 to 2,222,632
_RS10585
AZOBR_RS10590: AZOBR_RS10590 - cytochrome C oxidase subunit II, at 2,222,699 to 2,223,559
_RS10590
Group
Condition
AZOBR
_RS10570
AZOBR
_RS10575
AZOBR
_RS10580
AZOBR
_RS10585
AZOBR
_RS10590
stress
Chlorite 1 mM
-0.1
-0.3
-6.1
-3.9
-0.6
nitrogen source
L-Lysine (N)
-0.1
-0.1
-6.8
-3.0
-0.7
stress
nitrite 10 mM
-0.1
+0.0
-4.8
-2.7
-1.0
nitrogen source
L-Lysine (N)
-0.1
+0.1
-5.2
-2.7
-0.6
stress
Paraquat dichloride 0.04 mg/ml
-0.1
+0.0
-4.7
-1.3
-0.6
stress
D-Cycloserine 0.125 mg/ml
-0.4
-0.1
-3.6
-0.7
-0.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.8
-0.6
-2.5
-1.4
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.4
-1.9
-1.5
-0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.3
-2.5
-0.7
-0.0
carbon source
Ethanol (C)
-0.3
-0.4
-1.3
-1.0
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.0
-1.5
-1.1
-0.4
stress
copper (II) chloride 2 mM
-0.2
+0.1
-2.0
-0.6
-0.5
nitrogen source
D-Alanine (N)
-0.3
-0.1
-1.5
-0.8
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.2
-0.8
-0.9
-0.7
stress
3-octanone 6.3476 mM
-0.1
-0.4
-1.6
-0.2
-0.6
nitrogen source
D-Alanine (N)
-0.4
-0.0
-1.3
-0.7
-0.3
carbon source
Ethanol (C)
-0.1
-0.4
-1.1
-0.6
-0.5
carbon source
butyrate (C)
-0.5
-0.4
-0.4
-0.6
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.2
-1.6
-0.4
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.3
-1.3
-0.7
-0.6
carbon source
a-Ketoglutaric (C)
+0.8
+0.9
-0.5
+0.1
+0.8
motility
inner cut, LB soft agar motility assay
-0.1
-0.2
+2.0
+0.7
+0.2
motility
inner cut, LB soft agar motility assay
-0.4
-0.5
+1.7
+1.3
+0.5
lb
LB
-0.4
+0.1
+1.6
+1.1
+0.5
motility
inner cut, LB soft agar motility assay
+0.2
+0.1
+1.7
+1.1
+0.3
carbon source
Glycerol (C)
+0.5
+0.8
+0.8
+0.6
+0.6
carbon source
a-Ketoglutaric (C)
+1.1
+1.0
+0.2
+0.5
+0.7
lb
LB
+0.3
+0.4
+2.0
+1.5
+0.8
carbon source
Glycerol (C)
+1.0
+0.8
+1.3
+1.1
+1.0
stress
Sisomicin 0.01 mg/ml
+0.1
+0.3
+2.8
+1.5
+1.0
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