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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS10255 and AZOBR_RS10260 are separated by 200 nucleotides
AZOBR_RS10260 and AZOBR_RS10265 are separated by 277 nucleotides
AZOBR_RS10265 and AZOBR_RS10270 are separated by 3 nucleotides
AZOBR_RS10270 and AZOBR_RS10275 are separated by 809 nucleotides
AZOBR_RS10255: AZOBR_RS10255 - hypothetical protein, at 2,143,004 to 2,144,311
_RS10255
AZOBR_RS10260: AZOBR_RS10260 - hypothetical protein, at 2,144,512 to 2,147,739
_RS10260
AZOBR_RS10265: AZOBR_RS10265 - amino acid ABC transporter substrate-binding protein, at 2,148,017 to 2,148,856
_RS10265
AZOBR_RS10270: AZOBR_RS10270 - potassium transport protein Kup, at 2,148,860 to 2,150,704
_RS10270
AZOBR_RS10275: AZOBR_RS10275 - hypothetical protein, at 2,151,514 to 2,153,118
_RS10275
Group
Condition
AZOBR
_RS10255
AZOBR
_RS10260
AZOBR
_RS10265
AZOBR
_RS10270
AZOBR
_RS10275
stress
2-pentyl-furan 1.335528 mM
-0.8
+0.2
+0.2
-0.2
-0.2
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-0.6
+0.3
-0.2
+0.3
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
+0.5
-0.3
-0.7
+0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.1
-0.6
+0.2
+1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.9
+0.4
+0.5
-0.7
+0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
+0.0
+0.4
-0.5
+1.0
nitrogen source
L-Glutamic (N)
-0.3
+0.1
+0.1
-0.3
+1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.0
-0.1
+0.3
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.1
+0.1
+0.4
+0.8
nitrogen source
Glucuronamide (N)
+0.7
+0.2
+0.2
-0.2
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.2
-0.3
+0.4
+0.8
nitrogen source
L-Leucine (N)
+0.4
+0.3
+0.3
-0.2
+0.4
carbon source
D-Gluconic Acid (C)
+0.3
+0.2
-0.1
+0.1
+0.8
nitrogen source
D-Alanine (N)
+0.6
+0.3
+0.2
-0.1
+0.2
nitrogen source
Parabanic Acid (N)
+0.3
+0.2
+0.0
+0.3
+0.6
nitrogen source
Cytosine (N)
+0.5
+0.2
+0.0
-0.3
+0.9
motility
outer cut, LB soft agar motility assay
+1.0
-0.0
+0.3
-0.0
+0.2
nitrogen source
Parabanic Acid (N)
+0.6
+0.1
+0.1
+0.1
+0.5
nitrogen source
L-Histidine (N)
+1.1
+0.3
+0.3
-0.3
+0.1
carbon source
L-Lactate (C)
+0.6
+0.3
+0.3
+0.2
+0.3
lb
LB
+0.3
+0.2
+0.4
+0.2
+0.5
nitrogen source
Cytosine (N)
+0.2
+0.4
+0.1
+0.2
+0.9
motility
inner cut, LB soft agar motility assay
+1.5
+0.4
+0.0
-0.4
+0.1
carbon source
D-Gluconic Acid (C)
+0.6
+0.2
+0.1
+0.1
+0.9
carbon source
a-Ketoglutaric (C)
+0.4
-0.0
+0.2
+0.0
+1.4
carbon source
a-Ketoglutaric (C)
+0.5
+0.1
+0.0
+0.1
+1.2
carbon source
Glycerol (C)
+0.3
+0.3
+0.0
-0.3
+1.8
motility
inner cut, LB soft agar motility assay
+1.5
+0.0
+0.3
+0.1
+0.4
nitrogen source
L-Isoleucine (N)
+0.6
+0.3
+0.1
+0.1
+1.3
carbon source
Glycerol (C)
+0.1
+0.2
-0.1
+0.1
+2.4
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AZOBR_RS10265
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