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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS09050 and AZOBR_RS09055 are separated by 10 nucleotides
AZOBR_RS09055 and AZOBR_RS09060 are separated by 5 nucleotides
AZOBR_RS09060 and AZOBR_RS09065 are separated by 1 nucleotides
AZOBR_RS09065 and AZOBR_RS09070 are separated by 192 nucleotides
AZOBR_RS09050: AZOBR_RS09050 - Holliday junction DNA helicase RuvB, at 1,891,139 to 1,892,230
_RS09050
AZOBR_RS09055: AZOBR_RS09055 - acyl-CoA thioester hydrolase, at 1,892,241 to 1,892,702
_RS09055
AZOBR_RS09060: AZOBR_RS09060 - biopolymer transporter ExbB, at 1,892,708 to 1,893,430
_RS09060
AZOBR_RS09065: AZOBR_RS09065 - biopolymer transporter ExbD, at 1,893,432 to 1,893,914
_RS09065
AZOBR_RS09070: AZOBR_RS09070 - hypothetical protein, at 1,894,107 to 1,894,604
_RS09070
Group
Condition
AZOBR
_RS09050
AZOBR
_RS09055
AZOBR
_RS09060
AZOBR
_RS09065
AZOBR
_RS09070
carbon source
D-Gluconic Acid (C)
N.D.
-1.1
N.D.
N.D.
N.D.
stress
3-octanone 6.3476 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
nitrate 100 mM
N.D.
-0.7
N.D.
N.D.
N.D.
stress
2-pentyl-furan 1.335528 mM
N.D.
-0.7
N.D.
N.D.
N.D.
stress
Vancomycin 0.03 mg/ml
N.D.
-0.7
N.D.
N.D.
N.D.
stress
Chlorite 1 mM
N.D.
-0.6
N.D.
N.D.
N.D.
nitrogen source
L-Phenylalanine (N)
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
L-Proline (C)
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
Glycerol (C)
N.D.
-0.6
N.D.
N.D.
N.D.
anaerobic; rich media
LB; anaerobic
N.D.
-0.6
N.D.
N.D.
N.D.
stress
copper (II) chloride 2 mM
N.D.
-0.6
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
-0.6
N.D.
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
-0.6
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.2 mM
N.D.
-0.6
N.D.
N.D.
N.D.
stress
Aluminum chloride 5 mM
N.D.
-0.6
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 0.5 mM
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
L-Lactate (C)
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
pyruvate (C)
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
-0.5
N.D.
N.D.
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
-0.5
N.D.
N.D.
N.D.
stress
2-pentyl-furan 1.335528 mM
N.D.
-0.5
N.D.
N.D.
N.D.
stress
1-octen-3-ol 0.6030326667 mM
N.D.
-0.5
N.D.
N.D.
N.D.
lb
LB
N.D.
-0.5
N.D.
N.D.
N.D.
lb
LB
N.D.
+0.5
N.D.
N.D.
N.D.
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
N.D.
+0.6
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.6
N.D.
N.D.
N.D.
nitrogen source
D-Alanine (N)
N.D.
+0.7
N.D.
N.D.
N.D.
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