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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS08485 and AZOBR_RS08490 are separated by 160 nucleotides
AZOBR_RS08490 and AZOBR_RS08500 are separated by 987 nucleotides
AZOBR_RS08500 and AZOBR_RS08505 are separated by 39 nucleotides
AZOBR_RS08505 and AZOBR_RS08510 are separated by 51 nucleotides
AZOBR_RS08485: AZOBR_RS08485 - hypothetical protein, at 1,781,260 to 1,781,493
_RS08485
AZOBR_RS08490: AZOBR_RS08490 - hypothetical protein, at 1,781,654 to 1,781,872
_RS08490
AZOBR_RS08500: AZOBR_RS08500 - ABC transporter permease, at 1,782,860 to 1,783,843
_RS08500
AZOBR_RS08505: AZOBR_RS08505 - hypothetical protein, at 1,783,883 to 1,784,560
_RS08505
AZOBR_RS08510: AZOBR_RS08510 - alanine dehydrogenase, at 1,784,612 to 1,785,730
_RS08510
Group
Condition
AZOBR
_RS08485
AZOBR
_RS08490
AZOBR
_RS08500
AZOBR
_RS08505
AZOBR
_RS08510
stress
1-octen-3-ol 0.6030326667 mM
N.D.
N.D.
-0.3
-0.3
-0.5
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
N.D.
+0.0
-0.6
-0.3
lb no stress control
LB no stress control
N.D.
N.D.
+0.0
-0.7
-0.1
stress
1-octen-3-ol 0.7753276667 mM
N.D.
N.D.
+0.2
-1.0
+0.1
nitrogen source
casaminos (N)
N.D.
N.D.
-0.4
-0.2
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.2
-0.6
-0.1
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
-0.1
-0.6
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.1
-0.7
+0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
N.D.
-0.2
+0.3
-0.3
nitrogen source
L-Phenylalanine (N)
N.D.
N.D.
-0.1
-0.4
+0.2
carbon source
D-Lactate (C)
N.D.
N.D.
-0.2
-0.3
+0.3
stress
3-octanone 5.2896 mM
N.D.
N.D.
-0.3
+0.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.2
-0.5
+0.3
stress
2-pentyl-furan 1.335528 mM
N.D.
N.D.
+0.1
-0.4
+0.2
stress
1-octen-3-ol 0.6784116667 mM
N.D.
N.D.
-0.4
+0.4
+0.0
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
+0.0
+0.5
-0.5
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
+0.0
-0.3
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
N.D.
-0.2
+0.2
+0.3
motility
outer cut, LB soft agar motility assay
N.D.
N.D.
+0.3
+0.4
-0.4
stress
2-pentyl-furan 1.780666667 mM
N.D.
N.D.
-0.7
+1.0
+0.0
stress
Vancomycin 0.03 mg/ml
N.D.
N.D.
-0.2
+0.4
+0.2
stress
2-pentyl-furan 1.335528 mM
N.D.
N.D.
-0.2
+0.4
+0.3
stress
Paraquat dichloride 0.02 mg/ml
N.D.
N.D.
-0.2
+0.5
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.3
-0.2
+0.4
stress
Sisomicin 0.01 mg/ml
N.D.
N.D.
-0.1
+0.6
+0.2
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
+0.1
+0.7
-0.2
stress
2-pentyl-furan 2.671 mM
N.D.
N.D.
-0.2
+0.8
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.6
+0.0
+0.2
stress
D-Cycloserine 0.125 mg/ml
N.D.
N.D.
+0.4
+0.5
+0.0
stress
2-pentyl-furan 1.335528 mM
N.D.
N.D.
+0.1
+0.8
+0.2
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