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Protein
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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS08360 and AZOBR_RS08365 are separated by 235 nucleotides
AZOBR_RS08365 and AZOBR_RS08370 overlap by 1 nucleotides
AZOBR_RS08370 and AZOBR_RS08375 are separated by 33 nucleotides
AZOBR_RS08375 and AZOBR_RS08380 are separated by 0 nucleotides
AZOBR_RS08360: AZOBR_RS08360 - cyclopropane-fatty-acyl-phospholipid synthase, at 1,757,859 to 1,759,046
_RS08360
AZOBR_RS08365: AZOBR_RS08365 - 50S ribosomal protein L9, at 1,759,282 to 1,759,848
_RS08365
AZOBR_RS08370: AZOBR_RS08370 - membrane protein, at 1,759,848 to 1,760,804
_RS08370
AZOBR_RS08375: AZOBR_RS08375 - 30S ribosomal protein S18, at 1,760,838 to 1,761,110
_RS08375
AZOBR_RS08380: AZOBR_RS08380 - 30S ribosomal protein S6, at 1,761,111 to 1,761,548
_RS08380
Group
Condition
AZOBR
_RS08360
AZOBR
_RS08365
AZOBR
_RS08370
AZOBR
_RS08375
AZOBR
_RS08380
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.8
N.D.
N.D.
N.D.
N.D.
stress
3-octanone 5.2896 mM
-0.5
N.D.
N.D.
N.D.
N.D.
nitrogen source
casaminos (N)
-0.4
N.D.
N.D.
N.D.
N.D.
stress
1-octen-3-ol 0.6784116667 mM
-0.4
N.D.
N.D.
N.D.
N.D.
nitrogen source
casaminos (N)
-0.4
N.D.
N.D.
N.D.
N.D.
stress
3-octanone 6.3476 mM
-0.3
N.D.
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
N.D.
N.D.
N.D.
N.D.
stress
3-octanone 5.2896 mM
-0.3
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Threonine (N)
-0.3
N.D.
N.D.
N.D.
N.D.
stress
2-pentyl-furan 2.671 mM
-0.3
N.D.
N.D.
N.D.
N.D.
stress
1-octen-3-ol 0.6030326667 mM
-0.3
N.D.
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
+0.3
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Serine (N)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
+0.3
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Phenylalanine (N)
+0.3
N.D.
N.D.
N.D.
N.D.
stress
2-pentyl-furan 1.780666667 mM
+0.3
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
N.D.
N.D.
N.D.
N.D.
lb
LB
+0.3
N.D.
N.D.
N.D.
N.D.
lb
LB
+0.3
N.D.
N.D.
N.D.
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C)
+0.4
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
N.D.
N.D.
N.D.
N.D.
stress
Benzethonium chloride 0.003 mM
+0.4
N.D.
N.D.
N.D.
N.D.
stress
3-octanone 6.3476 mM
+0.4
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Leucine (N)
+0.4
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
N.D.
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Glutamic (N)
+0.5
N.D.
N.D.
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
+0.6
N.D.
N.D.
N.D.
N.D.
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