Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS08005 and AZOBR_RS08010 are separated by 128 nucleotidesAZOBR_RS08010 and AZOBR_RS08020 are separated by 1839 nucleotidesAZOBR_RS08020 and AZOBR_RS08025 are separated by 37 nucleotidesAZOBR_RS08025 and AZOBR_RS08030 are separated by 258 nucleotides AZOBR_RS08005: AZOBR_RS08005 - acetyltransferase, at 1,689,058 to 1,689,618 _RS08005 AZOBR_RS08010: AZOBR_RS08010 - FmdB family transcriptional regulator, at 1,689,747 to 1,689,977 _RS08010 AZOBR_RS08020: AZOBR_RS08020 - D-alanine dehydrogenase (EC 1.4.99.-) (from data), at 1,691,817 to 1,693,127 _RS08020 AZOBR_RS08025: AZOBR_RS08025 - hypothetical protein, at 1,693,165 to 1,693,800 _RS08025 AZOBR_RS08030: AZOBR_RS08030 - glutamine amidotransferase, at 1,694,059 to 1,694,631 _RS08030
Group Condition AZOBR_RS08005 AZOBR_RS08010 AZOBR_RS08020 AZOBR_RS08025 AZOBR_RS08030
nitrogen source D-Alanine (N) +0.1 +0.3 -5.4 +0.2 N.D.
nitrogen source D-Alanine (N) -0.1 +0.2 -4.6 -0.2 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.2 -0.4 -0.5 -0.4 N.D.
motility inner cut, LB soft agar motility assay -0.4 -0.2 -0.2 -0.6 N.D.
nitrogen source L-Isoleucine (N) -0.3 -0.1 -0.0 -1.0 N.D.
stress 2-pentyl-furan 1.780666667 mM -0.1 -0.3 -0.3 -0.6 N.D.
stress 3-octanone 6.3476 mM -0.2 -0.1 -0.2 -0.8 N.D.
stress 3-octanone 6.3476 mM -0.2 -0.3 -0.1 -0.6 N.D.
stress 3-octanone 6.3476 mM +0.2 -0.4 -0.5 -0.3 N.D.
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days +0.1 -0.8 +0.1 -0.3 N.D.
stress 3-octanone 5.2896 mM -0.5 +0.2 -0.3 -0.2 N.D.
nitrogen source Glucuronamide (N) +0.1 +0.2 +0.1 -0.9 N.D.
stress 1-octen-3-ol 0.7753276667 mM +0.4 -0.2 -0.3 -0.5 N.D.
stress 2-pentyl-furan 1.335528 mM +0.4 -0.1 -0.3 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.0 +0.2 -0.7 N.D.
stress 2-pentyl-furan 1.780666667 mM +0.5 -0.4 -0.6 +1.0 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 -0.3 +0.3 -0.4 N.D.
nitrogen source L-Glutamic (N) +0.6 +0.1 +0.2 -0.4 N.D.
stress Benzethonium chloride 0.003 mM +0.1 +0.2 -0.5 +0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +0.2 -0.1 -0.4 N.D.
lb LB -0.2 +0.5 +0.5 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +0.2 +0.4 -0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +0.4 +0.3 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 -0.1 +0.3 +0.4 N.D.
stress Paraquat dichloride 0.04 mg/ml +0.4 -0.1 +0.6 +0.6 N.D.
lb LB +0.5 +0.1 +0.8 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 -0.4 +0.3 +0.6 N.D.
nitrogen source L-Threonine (N) +0.2 +0.3 +0.5 +0.7 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +0.5 +0.2 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +0.6 +0.4 -0.0 N.D.
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