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Protein
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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS07880 and AZOBR_RS07885 are separated by 92 nucleotides
AZOBR_RS07885 and AZOBR_RS07890 are separated by 488 nucleotides
AZOBR_RS07890 and AZOBR_RS07895 are separated by 200 nucleotides
AZOBR_RS07895 and AZOBR_RS07900 are separated by 260 nucleotides
AZOBR_RS07880: AZOBR_RS07880 - conserved exported protein of unknown function, at 1,660,793 to 1,660,999
_RS07880
AZOBR_RS07885: AZOBR_RS07885 - spermidine/putrescine ABC transporter substrate-binding protein, at 1,661,092 to 1,662,393
_RS07885
AZOBR_RS07890: AZOBR_RS07890 - acetoin utilization protein, at 1,662,882 to 1,663,811
_RS07890
AZOBR_RS07895: AZOBR_RS07895 - GCN5 family acetyltransferase, at 1,664,012 to 1,664,437
_RS07895
AZOBR_RS07900: AZOBR_RS07900 - 2-dehydropantoate 2-reductase, at 1,664,698 to 1,665,723
_RS07900
Group
Condition
AZOBR
_RS07880
AZOBR
_RS07885
AZOBR
_RS07890
AZOBR
_RS07895
AZOBR
_RS07900
stress
D-Cycloserine 0.125 mg/ml
N.D.
-0.0
-0.4
-0.2
-0.4
stress
2-pentyl-furan 1.335528 mM
N.D.
-0.2
-0.2
-0.1
-0.5
stress
2-pentyl-furan 2.671 mM
N.D.
-0.0
-0.2
-0.2
-0.5
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.2
+0.0
+0.2
-0.9
stress
2-pentyl-furan 1.780666667 mM
N.D.
+0.0
+0.1
-0.2
-0.6
stress
3-octanone 6.3476 mM
N.D.
-0.1
-0.1
+0.0
-0.7
stress
1-octen-3-ol 0.6784116667 mM
N.D.
-0.1
+0.2
-0.0
-0.8
lb no stress control
LB no stress control
N.D.
-0.2
-0.1
+0.1
-0.5
stress
2-pentyl-furan 1.335528 mM
N.D.
-0.2
+0.2
+0.0
-0.6
lb no stress control
LB no stress control
N.D.
-0.0
+0.0
+0.2
-0.9
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
+0.1
-0.1
-0.1
-0.5
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
+0.0
+0.2
-0.0
-0.8
stress
3-octanone 4.2317 mM
N.D.
-0.2
+0.1
+0.0
-0.5
stress
2-pentyl-furan 1.335528 mM
N.D.
+0.1
+0.3
-0.4
-0.5
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
+0.1
+0.2
-0.0
-0.8
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
N.D.
-0.1
+0.2
+0.2
-0.7
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.0
+0.3
+0.2
-1.0
stress
3-octanone 6.3476 mM
N.D.
-0.3
+0.5
+0.1
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
+0.1
+0.2
+0.0
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
-0.0
+0.3
-0.1
-0.5
motility
inner cut, LB soft agar motility assay
N.D.
+0.2
-0.4
-0.1
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.2
+0.1
-0.4
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.1
-0.5
+0.2
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.3
+0.9
-0.2
+0.0
motility
inner cut, LB soft agar motility assay
N.D.
-0.3
-0.0
+0.0
+0.7
stress
Paraquat dichloride 0.02 mg/ml
N.D.
+0.4
+0.4
-0.0
-0.1
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
N.D.
+0.2
+0.2
+0.1
+0.3
nitrogen source
L-Glutamic (N)
N.D.
-0.1
+0.2
+0.2
+0.6
motility
outer cut, LB soft agar motility assay
N.D.
-0.2
+0.2
+0.1
+0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.3
+0.5
+0.2
+0.1
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