Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS07580 and AZOBR_RS07585 are separated by 270 nucleotidesAZOBR_RS07585 and AZOBR_RS07590 are separated by 155 nucleotidesAZOBR_RS07590 and AZOBR_RS07595 are separated by 318 nucleotidesAZOBR_RS07595 and AZOBR_RS07600 are separated by 55 nucleotides AZOBR_RS07580: AZOBR_RS07580 - membrane protein, at 1,594,646 to 1,594,870 _RS07580 AZOBR_RS07585: AZOBR_RS07585 - peroxiredoxin, at 1,595,141 to 1,595,671 _RS07585 AZOBR_RS07590: AZOBR_RS07590 - histidine ammonia-lyase, at 1,595,827 to 1,597,308 _RS07590 AZOBR_RS07595: AZOBR_RS07595 - ABC transporter ATP-binding protein, at 1,597,627 to 1,599,243 _RS07595 AZOBR_RS07600: AZOBR_RS07600 - type I secretion membrane fusion protein HlyD, at 1,599,299 to 1,600,660 _RS07600
Group Condition AZOBR_RS07580 AZOBR_RS07585 AZOBR_RS07590 AZOBR_RS07595 AZOBR_RS07600
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -1.3 -3.0 +0.0 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.7 -1.3 -0.1 -0.2
nitrogen source nitrate (N) -0.2 -0.3 -0.5 -0.5 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.9 -1.1 +0.6 -0.1
stress 2-pentyl-furan 2.671 mM -0.0 -0.4 -0.4 +0.1 -0.7
stress D-Cycloserine 0.125 mg/ml -0.3 -0.2 -1.1 +0.5 -0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.1 -0.3 -0.7 +0.2 -0.2
stress Benzethonium chloride 0.003 mM -0.3 -0.4 -0.7 +0.5 -0.3
stress 2-Furfuraldehyde 0.2 vol% +0.2 -0.6 -0.9 +0.1 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.3 -1.3 +0.3 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.1 -1.0 +0.0 +0.2
lb LB -0.1 -0.8 -0.6 +0.3 +0.1
stress nitrate 100 mM -0.4 -0.3 -0.7 +0.3 +0.1
motility inner cut, LB soft agar motility assay +0.4 +0.0 -1.5 +0.5 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -1.1 -0.4 +0.4 -0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.1 -0.3 -0.8 +0.3 +0.2
lb LB -0.1 -0.2 -0.7 +0.4 -0.2
motility inner cut, LB soft agar motility assay +0.3 +0.1 -1.3 +0.3 -0.1
lb LB -0.1 +0.3 -0.7 +0.3 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.7 -0.9 +0.5 +0.2
stress Bacitracin 0.25 mg/ml +0.1 -0.2 -0.9 +0.4 +0.1
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.3 +0.2 -0.5 +0.3 -0.5
nitrogen source L-Isoleucine (N) -0.7 +0.2 +0.2 +0.3 -0.1
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.2 -0.4 +0.3 +0.3 -0.2
motility inner cut, LB soft agar motility assay -0.1 -0.0 -1.0 +1.0 +0.5
stress Chlorite 1 mM +0.5 -0.3 -0.3 +0.6 +0.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.0 -0.4 +0.5 +0.5 +0.3
carbon source D-Gluconic Acid (C) -0.3 +0.4 +0.6 -0.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.2 -0.8 +0.8 +0.5
stress Nickel (II) chloride 0.5 mM +0.2 +0.4 +1.8 -0.4 -0.2
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