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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS07495 and AZOBR_RS07505 are separated by 1102 nucleotides
AZOBR_RS07505 and AZOBR_RS07510 are separated by 160 nucleotides
AZOBR_RS07510 and AZOBR_RS07515 are separated by 143 nucleotides
AZOBR_RS07515 and AZOBR_RS07520 are separated by 103 nucleotides
AZOBR_RS07495: AZOBR_RS07495 - peptidylprolyl isomerase, at 1,576,722 to 1,578,608
_RS07495
AZOBR_RS07505: AZOBR_RS07505 - preprotein translocase subunit SecG, at 1,579,711 to 1,580,043
_RS07505
AZOBR_RS07510: AZOBR_RS07510 - CTP synthase, at 1,580,204 to 1,581,832
_RS07510
AZOBR_RS07515: AZOBR_RS07515 - carboxymethylenebutenolidase, at 1,581,976 to 1,582,674
_RS07515
AZOBR_RS07520: AZOBR_RS07520 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,582,778 to 1,583,605
_RS07520
Group
Condition
AZOBR
_RS07495
AZOBR
_RS07505
AZOBR
_RS07510
AZOBR
_RS07515
AZOBR
_RS07520
stress
Paraquat dichloride 0.04 mg/ml
-3.4
N.D.
N.D.
+0.4
N.D.
stress
Sisomicin 0.01 mg/ml
-2.3
N.D.
N.D.
-0.2
N.D.
stress
3-octanone 5.2896 mM
-2.1
N.D.
N.D.
-0.2
N.D.
lb no stress control
LB no stress control
-2.2
N.D.
N.D.
-0.1
N.D.
stress
1-octen-3-ol 0.6784116667 mM
-2.1
N.D.
N.D.
-0.0
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
-1.9
N.D.
N.D.
-0.3
N.D.
lb no stress control
LB no stress control
-2.1
N.D.
N.D.
+0.0
N.D.
stress
2-pentyl-furan 2.671 mM
-1.5
N.D.
N.D.
-0.5
N.D.
lb no stress control
LB no stress control
-2.1
N.D.
N.D.
+0.1
N.D.
stress
1-octen-3-ol 0.6784116667 mM
-1.7
N.D.
N.D.
-0.2
N.D.
stress
1-octen-3-ol 0.7753276667 mM
-1.6
N.D.
N.D.
-0.3
N.D.
lb no stress control
LB no stress control
-1.9
N.D.
N.D.
-0.0
N.D.
stress
1-octen-3-ol 0.6784116667 mM
-1.7
N.D.
N.D.
-0.1
N.D.
stress
1-octen-3-ol 0.6030326667 mM
-1.6
N.D.
N.D.
-0.2
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-0.5
N.D.
N.D.
-1.3
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-1.8
N.D.
N.D.
+0.0
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-1.5
N.D.
N.D.
-0.3
N.D.
dmso control
DMSO control
-1.9
N.D.
N.D.
+0.1
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
-1.5
N.D.
N.D.
-0.3
N.D.
dmso control
DMSO control
-1.8
N.D.
N.D.
+0.1
N.D.
stress
3-octanone 6.3476 mM
-1.9
N.D.
N.D.
+0.2
N.D.
stress
1-octen-3-ol 0.7753276667 mM
-2.0
N.D.
N.D.
+0.3
N.D.
stress
1-octen-3-ol 0.7753276667 mM
-1.7
N.D.
N.D.
+0.1
N.D.
stress
copper (II) chloride 2 mM
-1.9
N.D.
N.D.
+0.3
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
-1.7
N.D.
N.D.
+0.2
N.D.
stress
3-octanone 6.3476 mM
-1.6
N.D.
N.D.
+0.2
N.D.
motility
outer cut, LB soft agar motility assay
-1.6
N.D.
N.D.
+0.4
N.D.
stress
2-pentyl-furan 1.780666667 mM
-1.6
N.D.
N.D.
+0.5
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
-1.1
N.D.
N.D.
+0.6
N.D.
motility
inner cut, LB soft agar motility assay
-0.9
N.D.
N.D.
+0.9
N.D.
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