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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS07030 and AZOBR_RS07035 are separated by 119 nucleotides
AZOBR_RS07035 and AZOBR_RS07040 are separated by 129 nucleotides
AZOBR_RS07040 and AZOBR_RS07045 are separated by 56 nucleotides
AZOBR_RS07045 and AZOBR_RS07050 are separated by 27 nucleotides
AZOBR_RS07030: AZOBR_RS07030 - hemerythrin, at 1,487,813 to 1,488,271
_RS07030
AZOBR_RS07035: AZOBR_RS07035 - dihydropteroate synthase, at 1,488,391 to 1,489,551
_RS07035
AZOBR_RS07040: AZOBR_RS07040 - phosphoglucosamine mutase, at 1,489,681 to 1,491,048
_RS07040
AZOBR_RS07045: AZOBR_RS07045 - phosphomethylpyrimidine kinase, at 1,491,105 to 1,491,905
_RS07045
AZOBR_RS07050: AZOBR_RS07050 - transcriptional regulator, at 1,491,933 to 1,493,327
_RS07050
Group
Condition
AZOBR
_RS07030
AZOBR
_RS07035
AZOBR
_RS07040
AZOBR
_RS07045
AZOBR
_RS07050
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.1
N.D.
N.D.
N.D.
-0.3
nitrogen source
D-Alanine (N)
-0.3
N.D.
N.D.
N.D.
-1.0
nitrogen source
L-Threonine (N)
-0.2
N.D.
N.D.
N.D.
-1.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.6
N.D.
N.D.
N.D.
+0.3
stress
D-Cycloserine 0.125 mg/ml
-1.0
N.D.
N.D.
N.D.
-0.1
nitrogen source
D-Alanine (N)
-0.3
N.D.
N.D.
N.D.
-0.7
nitrogen source
L-Lysine (N)
-0.4
N.D.
N.D.
N.D.
-0.6
stress
Cobalt chloride 0.3 mM
-0.9
N.D.
N.D.
N.D.
+0.1
stress
3-octanone 6.3476 mM
-0.6
N.D.
N.D.
N.D.
-0.2
carbon source
Ethanol (C)
-0.7
N.D.
N.D.
N.D.
+0.1
stress
2-pentyl-furan 1.335528 mM
-0.7
N.D.
N.D.
N.D.
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
N.D.
N.D.
N.D.
+0.3
carbon source
L-Leucine (C)
+0.3
N.D.
N.D.
N.D.
-0.5
motility
inner cut, LB soft agar motility assay
-0.8
N.D.
N.D.
N.D.
+0.7
motility
outer cut, LB soft agar motility assay
-1.0
N.D.
N.D.
N.D.
+0.9
carbon source
D-Gluconic Acid (C)
+0.4
N.D.
N.D.
N.D.
-0.5
nitrogen source
L-Phenylalanine (N)
-0.5
N.D.
N.D.
N.D.
+0.5
nitrogen source
L-Citrulline (N)
-0.4
N.D.
N.D.
N.D.
+0.4
nitrogen source
L-Leucine (N)
+0.5
N.D.
N.D.
N.D.
-0.4
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
+0.5
N.D.
N.D.
N.D.
-0.4
stress
Bacitracin 0.25 mg/ml
-0.3
N.D.
N.D.
N.D.
+0.6
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
+0.5
N.D.
N.D.
N.D.
+0.3
anaerobic; rich media
LB; anaerobic
+0.3
N.D.
N.D.
N.D.
+0.5
lb
LB
+0.2
N.D.
N.D.
N.D.
+0.7
stress
Paraquat dichloride 0.04 mg/ml
-0.0
N.D.
N.D.
N.D.
+0.9
stress
Chlorite 1 mM
+0.6
N.D.
N.D.
N.D.
+0.4
nitrogen source
L-Citrulline (N)
+0.0
N.D.
N.D.
N.D.
+1.0
stress
3-octanone 6.3476 mM
+0.7
N.D.
N.D.
N.D.
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+1.3
N.D.
N.D.
N.D.
+0.1
stress
Benzethonium chloride 0.003 mM
+0.5
N.D.
N.D.
N.D.
+1.4
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