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Protein
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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS05065 and AZOBR_RS05070 are separated by 144 nucleotides
AZOBR_RS05070 and AZOBR_RS05075 are separated by 147 nucleotides
AZOBR_RS05075 and AZOBR_RS05080 are separated by 207 nucleotides
AZOBR_RS05080 and AZOBR_RS05085 are separated by 268 nucleotides
AZOBR_RS05065: AZOBR_RS05065 - hypothetical protein, at 1,074,448 to 1,074,993
_RS05065
AZOBR_RS05070: AZOBR_RS05070 - peptidase A8, at 1,075,138 to 1,075,641
_RS05070
AZOBR_RS05075: AZOBR_RS05075 - isoleucyl-tRNA synthetase, at 1,075,789 to 1,078,644
_RS05075
AZOBR_RS05080: AZOBR_RS05080 - orotate phosphoribosyltransferase, at 1,078,852 to 1,079,544
_RS05080
AZOBR_RS05085: AZOBR_RS05085 - riboflavin kinase, at 1,079,813 to 1,080,769
_RS05085
Group
Condition
AZOBR
_RS05065
AZOBR
_RS05070
AZOBR
_RS05075
AZOBR
_RS05080
AZOBR
_RS05085
carbon source
D-Fructose (C)
-0.7
N.D.
N.D.
-6.3
N.D.
nitrogen source
L-Threonine (N)
-0.8
N.D.
N.D.
-4.5
N.D.
nitrogen source
L-Leucine (N)
-0.6
N.D.
N.D.
-4.6
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
-2.1
N.D.
N.D.
-2.9
N.D.
carbon source
L-Proline (C)
-0.1
N.D.
N.D.
-4.8
N.D.
nitrogen source
Urea (N)
-0.1
N.D.
N.D.
-4.7
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.6
N.D.
N.D.
-2.1
N.D.
carbon source
Glycerol (C)
-0.1
N.D.
N.D.
-4.7
N.D.
nitrogen source
L-Asparagine (N)
+0.0
N.D.
N.D.
-4.7
N.D.
nitrogen source
Glucuronamide (N)
+0.0
N.D.
N.D.
-4.6
N.D.
carbon source
D,L-Lactate (C)
-0.9
N.D.
N.D.
-3.5
N.D.
nitrogen source
L-Isoleucine (N)
-0.4
N.D.
N.D.
-3.9
N.D.
stress
Benzethonium chloride 0.003 mM
-1.0
N.D.
N.D.
-3.2
N.D.
carbon source
L-Malic (C)
-0.7
N.D.
N.D.
-3.4
N.D.
carbon source
L-Glutamine (C)
-0.1
N.D.
N.D.
-3.9
N.D.
carbon source
L-Glutamine (C)
-0.7
N.D.
N.D.
-3.3
N.D.
carbon source
a-Ketoglutaric (C)
-0.3
N.D.
N.D.
-3.6
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
-1.1
N.D.
N.D.
-2.7
N.D.
carbon source
L-Lactate (C)
-0.6
N.D.
N.D.
-3.3
N.D.
carbon source
a-Ketoglutaric (C)
-0.6
N.D.
N.D.
-3.2
N.D.
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
-0.8
N.D.
N.D.
-3.0
N.D.
carbon source
Ethanol (C)
-0.8
N.D.
N.D.
-3.0
N.D.
nitrogen source
L-Aspartic Acid (N)
-0.1
N.D.
N.D.
-3.7
N.D.
carbon source
D-Lactate (C)
-0.3
N.D.
N.D.
-3.3
N.D.
nitrogen source
L-Phenylalanine (N)
-0.2
N.D.
N.D.
-3.4
N.D.
nitrogen source
D-Alanine (N)
-0.5
N.D.
N.D.
-3.0
N.D.
carbon source
D-Fructose (C)
-0.3
N.D.
N.D.
-3.2
N.D.
nitrogen source
L-Threonine (N)
-1.2
N.D.
N.D.
-2.2
N.D.
nitrogen source
L-Lysine (N)
-0.7
N.D.
N.D.
-2.7
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-1.5
N.D.
N.D.
-1.9
N.D.
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