Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS04800 and AZOBR_RS04805 are separated by 18 nucleotidesAZOBR_RS04805 and AZOBR_RS04810 are separated by 60 nucleotidesAZOBR_RS04810 and AZOBR_RS04815 are separated by 181 nucleotidesAZOBR_RS04815 and AZOBR_RS04820 are separated by 176 nucleotides AZOBR_RS04800: AZOBR_RS04800 - pyruvate dehydrogenase subunit beta, at 1,009,419 to 1,010,450 _RS04800 AZOBR_RS04805: AZOBR_RS04805 - dihydrolipoyllysine acetyltransferase, at 1,010,469 to 1,011,602 _RS04805 AZOBR_RS04810: AZOBR_RS04810 - shikimate 5-dehydrogenase, at 1,011,663 to 1,012,448 _RS04810 AZOBR_RS04815: AZOBR_RS04815 - radical SAM protein, at 1,012,630 to 1,013,547 _RS04815 AZOBR_RS04820: AZOBR_RS04820 - oxidoreductase, at 1,013,724 to 1,014,485 _RS04820
Group Condition AZOBR_RS04800 AZOBR_RS04805 AZOBR_RS04810 AZOBR_RS04815 AZOBR_RS04820
stress 2-pentyl-furan 2.671 mM -1.0 +0.3 N.D. -0.7 -0.3
nitrogen source casaminos (N) -0.2 -0.2 N.D. -0.3 -0.5
stress 2-pentyl-furan 1.780666667 mM -0.4 -0.3 N.D. -0.4 -0.2
nitrogen source casaminos (N) -0.3 -0.1 N.D. -0.3 -0.3
stress 3-octanone 4.2317 mM -0.6 -0.1 N.D. +0.1 -0.1
nitrogen source L-Isoleucine (N) -0.1 +0.2 N.D. -0.8 +0.1
stress 2-pentyl-furan 1.335528 mM -0.1 -0.1 N.D. +0.3 -0.8
nitrogen source L-Phenylalanine (N) -0.2 +0.3 N.D. -0.5 -0.2
stress 3-octanone 5.2896 mM -0.1 -0.2 N.D. +0.2 -0.4
stress 2-pentyl-furan 1.335528 mM -0.3 +0.2 N.D. +0.1 -0.6
stress 3-octanone 6.3476 mM -0.4 -0.1 N.D. +0.2 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.2 N.D. -0.7 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.0 N.D. +0.3 -0.5
nitrogen source Parabanic Acid (N) -0.4 +0.1 N.D. -0.2 +0.2
nitrogen source L-Glutamic (N) -0.2 -0.6 N.D. +0.1 +0.4
stress 2-pentyl-furan 1.780666667 mM +0.3 +0.1 N.D. -0.0 -0.6
lb LB -0.3 +0.3 N.D. -0.1 -0.2
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.2 -0.3 N.D. +0.5 -0.1
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3 +0.3 N.D. +0.1 -0.2
motility inner cut, LB soft agar motility assay +0.3 +0.3 N.D. -0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.2 N.D. +0.7 -0.5
stress Paraquat dichloride 0.04 mg/ml +0.5 +0.2 N.D. +0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.2 N.D. +0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.4 N.D. +0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.2 N.D. +0.1 +0.4
stress 2-pentyl-furan 1.780666667 mM +0.3 -0.5 N.D. +0.1 +0.6
motility inner cut, LB soft agar motility assay +0.0 +0.6 N.D. +0.1 +0.2
stress Cobalt chloride 0.3 mM +0.2 +0.2 N.D. +0.5 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.3 N.D. +0.8 +0.2
stress Sisomicin 0.01 mg/ml +0.4 +0.5 N.D. -0.1 +0.5
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