Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS04790 and AZOBR_RS04795 are separated by 54 nucleotidesAZOBR_RS04795 and AZOBR_RS04800 are separated by 41 nucleotidesAZOBR_RS04800 and AZOBR_RS04805 are separated by 18 nucleotidesAZOBR_RS04805 and AZOBR_RS04810 are separated by 60 nucleotides AZOBR_RS04790: AZOBR_RS04790 - acetoin catabolism protein X, at 1,007,281 to 1,008,339 _RS04790 AZOBR_RS04795: AZOBR_RS04795 - acetoin:2 6-dichlorophenolindophenol oxidoreductase subunit alpha, at 1,008,394 to 1,009,377 _RS04795 AZOBR_RS04800: AZOBR_RS04800 - pyruvate dehydrogenase subunit beta, at 1,009,419 to 1,010,450 _RS04800 AZOBR_RS04805: AZOBR_RS04805 - dihydrolipoyllysine acetyltransferase, at 1,010,469 to 1,011,602 _RS04805 AZOBR_RS04810: AZOBR_RS04810 - shikimate 5-dehydrogenase, at 1,011,663 to 1,012,448 _RS04810
Group Condition AZOBR_RS04790 AZOBR_RS04795 AZOBR_RS04800 AZOBR_RS04805 AZOBR_RS04810
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.8 +0.5 +0.5 -0.4 N.D.
nitrogen source L-Isoleucine (N) -2.3 -0.4 -0.1 +0.2 N.D.
nitrogen source L-Glutamic (N) -1.2 +0.1 -0.2 -0.6 N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.7 -0.0 -0.3 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -0.4 -0.2 -0.2 N.D.
stress Paraquat dichloride 0.02 mg/ml -1.3 -0.2 -0.2 +0.2 N.D.
motility inner cut, LB soft agar motility assay -1.6 -0.0 +0.3 +0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 +0.2 -0.2 -0.0 N.D.
stress 3-octanone 6.3476 mM +0.2 -0.6 -0.4 -0.1 N.D.
carbon source L-Lactate (C) -0.5 +0.2 -0.3 -0.2 N.D.
stress 6-Pentyl-2H-pyran-2-one 0.7162051667 mM -0.2 -0.5 +0.3 -0.4 N.D.
stress 3-octanone 4.2317 mM +0.3 -0.3 -0.6 -0.1 N.D.
motility outer cut, LB soft agar motility assay -1.2 -0.2 +0.5 +0.2 N.D.
stress 2-pentyl-furan 1.780666667 mM -0.2 -0.2 +0.3 -0.5 N.D.
lb LB +0.4 -0.5 -0.2 -0.0 N.D.
motility inner cut, LB soft agar motility assay -0.9 +0.2 +0.5 -0.1 N.D.
stress 2-pentyl-furan 2.671 mM +0.4 +0.0 -1.0 +0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 +0.3 -0.1 +0.2 N.D.
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.4 -0.5 +0.1 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 +0.5 +0.3 -0.2 N.D.
stress Sisomicin 0.01 mg/ml -0.2 -0.6 +0.4 +0.5 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +1.0 -0.4 -0.5 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 -0.3 +0.2 -0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.4 -0.0 -0.4 N.D.
stress 3-octanone 5.2896 mM +0.9 +0.1 -0.1 -0.2 N.D.
stress 2-pentyl-furan 1.335528 mM +0.5 -0.5 +0.7 +0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 -0.3 -0.3 +0.3 N.D.
nitrogen source L-Histidine (N) +0.8 -0.0 +0.2 +0.1 N.D.
stress Chlorite 1 mM +0.9 -0.1 +0.0 +0.3 N.D.
stress Paraquat dichloride 0.04 mg/ml +1.4 +0.3 +0.5 +0.2 N.D.
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