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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS04710 and AZOBR_RS04715 are separated by 401 nucleotides
AZOBR_RS04715 and AZOBR_RS04720 overlap by 4 nucleotides
AZOBR_RS04720 and AZOBR_RS04725 overlap by 4 nucleotides
AZOBR_RS04725 and AZOBR_RS04730 are separated by 53 nucleotides
AZOBR_RS04710: AZOBR_RS04710 - hypothetical protein, at 991,726 to 991,977
_RS04710
AZOBR_RS04715: AZOBR_RS04715 - putative RND superfamily drug exporter, at 992,379 to 994,715
_RS04715
AZOBR_RS04720: AZOBR_RS04720 - conserved exported protein of unknown function, at 994,712 to 995,329
_RS04720
AZOBR_RS04725: AZOBR_RS04725 - thioesterase, at 995,326 to 995,733
_RS04725
AZOBR_RS04730: AZOBR_RS04730 - hypothetical protein, at 995,787 to 997,193
_RS04730
Group
Condition
AZOBR
_RS04710
AZOBR
_RS04715
AZOBR
_RS04720
AZOBR
_RS04725
AZOBR
_RS04730
stress
2-pentyl-furan 1.335528 mM
-1.3
+0.1
N.D.
-1.3
+0.1
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-1.0
-0.4
N.D.
-0.2
-0.7
stress
Benzethonium chloride 0.003 mM
-0.5
-0.1
N.D.
-0.3
-1.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.2
+0.0
N.D.
-0.4
-0.2
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
-0.9
-0.2
N.D.
-0.6
+0.1
nitrogen source
nitrate (N)
-1.0
+0.1
N.D.
-0.2
-0.3
lb no stress control
LB no stress control
-0.7
+0.0
N.D.
-0.4
-0.1
motility
outer cut, LB soft agar motility assay
-0.5
-0.2
N.D.
+0.2
-0.7
stress
2-pentyl-furan 1.780666667 mM
+0.2
+0.1
N.D.
-1.0
-0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
-0.1
-0.4
N.D.
-0.6
+0.1
motility
inner cut, LB soft agar motility assay
+0.2
-0.2
N.D.
-0.2
-0.6
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
+0.2
-0.1
N.D.
-0.5
-0.5
stress
2-pentyl-furan 1.780666667 mM
-0.3
+0.2
N.D.
-0.6
+0.0
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-0.4
+0.2
N.D.
-0.5
+0.2
nitrogen source
L-Isoleucine (N)
+0.4
+0.0
N.D.
-0.5
-0.4
motility
inner cut, LB soft agar motility assay
+0.4
-0.3
N.D.
+0.2
-0.6
nitrogen source
L-Citrulline (N)
-0.9
+0.2
N.D.
+0.3
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.8
+0.0
N.D.
-0.1
+0.6
stress
Paraquat dichloride 0.04 mg/ml
+0.2
-0.3
N.D.
+0.7
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.1
N.D.
-0.6
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
+0.4
-0.3
N.D.
-0.4
+0.2
nitrogen source
L-Leucine (N)
-0.6
+0.2
N.D.
+0.1
+0.3
stress
Chlorite 1 mM
+0.2
+0.1
N.D.
+0.4
-0.6
nitrogen source
L-Phenylalanine (N)
-0.4
-0.0
N.D.
+0.4
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.1
N.D.
-0.4
+0.4
stress
D-Cycloserine 0.125 mg/ml
-0.4
+0.3
N.D.
+0.2
+0.4
motility
inner cut, LB soft agar motility assay
+1.0
-0.2
N.D.
+0.1
-0.2
anaerobic; rich media
LB; anaerobic
+0.7
-0.3
N.D.
+0.4
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.6
N.D.
+0.4
-0.1
stress
3-octanone 6.3476 mM
+0.9
+0.5
N.D.
+0.2
+0.1
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