Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS03880 and AZOBR_RS03885 are separated by 159 nucleotidesAZOBR_RS03885 and AZOBR_RS03890 are separated by 149 nucleotidesAZOBR_RS03890 and AZOBR_RS03895 are separated by 95 nucleotidesAZOBR_RS03895 and AZOBR_RS03900 are separated by 11 nucleotides AZOBR_RS03880: AZOBR_RS03880 - recombinase RecR, at 819,020 to 819,613 _RS03880 AZOBR_RS03885: AZOBR_RS03885 - phosphoglycerate kinase, at 819,773 to 820,969 _RS03885 AZOBR_RS03890: AZOBR_RS03890 - methyltransferase UbiE, at 821,119 to 822,225 _RS03890 AZOBR_RS03895: AZOBR_RS03895 - hypothetical protein, at 822,321 to 823,928 _RS03895 AZOBR_RS03900: AZOBR_RS03900 - plasmid partitioning protein ParA, at 823,940 to 824,563 _RS03900
Group Condition AZOBR_RS03880 AZOBR_RS03885 AZOBR_RS03890 AZOBR_RS03895 AZOBR_RS03900
stress Paraquat dichloride 0.02 mg/ml -2.0 N.D. -0.1 -3.1 N.D.
stress D-Cycloserine 0.125 mg/ml -2.3 N.D. -0.2 -2.0 N.D.
motility inner cut, LB soft agar motility assay -2.3 N.D. +0.1 -2.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.2 N.D. +0.1 -2.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.0 N.D. +0.0 -1.0 N.D.
motility inner cut, LB soft agar motility assay -1.7 N.D. +0.1 -2.3 N.D.
lb LB -2.0 N.D. +0.2 -2.0 N.D.
motility outer cut, LB soft agar motility assay -2.5 N.D. +0.4 -1.6 N.D.
motility inner cut, LB soft agar motility assay -2.5 N.D. -0.2 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.3 N.D. -0.1 -0.1 N.D.
stress Chlorite 1 mM -3.0 N.D. +0.0 -0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.3 N.D. -0.1 -0.8 N.D.
stress Sisomicin 0.01 mg/ml -2.7 N.D. +0.2 -0.6 N.D.
lb LB -2.0 N.D. +0.2 -1.3 N.D.
stress Cobalt chloride 0.2 mM -2.4 N.D. -0.1 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.8 N.D. -0.2 +0.0 N.D.
stress Paraquat dichloride 0.04 mg/ml -2.8 N.D. -0.0 -0.1 N.D.
nitrogen source L-Histidine (N) -2.3 N.D. -0.2 -0.1 N.D.
stress 2-pentyl-furan 2.671 mM -1.0 N.D. -0.5 -0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 N.D. +0.5 -2.0 N.D.
nitrogen source L-Glutamic (N) -2.1 N.D. -0.3 +0.3 N.D.
stress Vancomycin 0.03 mg/ml -1.6 N.D. -0.3 -0.2 N.D.
stress benzoic 0.29 mg/ml -1.6 N.D. +0.1 -0.4 N.D.
stress Cobalt chloride 0.3 mM -2.2 N.D. +0.1 +0.1 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.9 N.D. +0.1 +0.1 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.2 N.D. +0.3 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 N.D. -0.4 +0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 N.D. +0.7 -0.5 N.D.
stress Benzethonium chloride 0.003 mM -1.9 N.D. +0.1 +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 N.D. +0.2 +0.6 N.D.
remove
AZOBR_RS03880
plot		 remove
AZOBR_RS03885
plot		 remove
AZOBR_RS03890		 remove
AZOBR_RS03895
plot		 remove
AZOBR_RS03900
plot