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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS03235 and AZOBR_RS03240 are separated by 134 nucleotides
AZOBR_RS03240 and AZOBR_RS03245 are separated by 141 nucleotides
AZOBR_RS03245 and AZOBR_RS03250 are separated by 65 nucleotides
AZOBR_RS03250 and AZOBR_RS03255 are separated by 107 nucleotides
AZOBR_RS03235: AZOBR_RS03235 - hypothetical protein, at 687,266 to 687,667
_RS03235
AZOBR_RS03240: AZOBR_RS03240 - recombinase XerD, at 687,802 to 688,683
_RS03240
AZOBR_RS03245: AZOBR_RS03245 - malate synthase, at 688,825 to 690,429
_RS03245
AZOBR_RS03250: AZOBR_RS03250 - hypothetical protein, at 690,495 to 690,929
_RS03250
AZOBR_RS03255: AZOBR_RS03255 - hypothetical protein, at 691,037 to 691,909
_RS03255
Group
Condition
AZOBR
_RS03235
AZOBR
_RS03240
AZOBR
_RS03245
AZOBR
_RS03250
AZOBR
_RS03255
motility
inner cut, LB soft agar motility assay
N.D.
-4.6
+0.3
-1.5
-0.1
stress
Benzethonium chloride 0.003 mM
N.D.
-5.0
-0.3
-0.7
+0.1
stress
Bacitracin 0.25 mg/ml
N.D.
-5.0
-0.1
-0.5
-0.1
motility
inner cut, LB soft agar motility assay
N.D.
-4.6
+0.3
-0.9
-0.3
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
-5.1
-0.1
-0.2
-0.2
lb
LB
N.D.
-4.9
-0.1
-0.3
-0.2
lb
LB
N.D.
-4.9
+0.0
-0.6
+0.0
stress
benzoic 0.145 mg/ml
N.D.
-4.9
-0.0
-0.5
+0.2
carbon source
D-Fructose (C)
N.D.
-5.0
-0.1
-0.0
-0.1
stress
2-Furfuraldehyde 0.2 vol%
N.D.
-4.7
-0.1
-0.2
+0.0
stress
Paraquat dichloride 0.02 mg/ml
N.D.
-4.9
-0.3
+0.3
-0.2
lb
LB
N.D.
-4.7
+0.0
-0.6
+0.3
stress
2-pentyl-furan 1.780666667 mM
N.D.
-4.9
-0.1
-0.2
+0.1
lb
LB
N.D.
-4.8
+0.3
-0.6
+0.1
stress
Sisomicin 0.01 mg/ml
N.D.
-4.9
+0.3
-0.6
+0.3
stress
nitrite 10 mM
N.D.
-5.0
-0.0
+0.0
+0.1
carbon source
a-Ketoglutaric (C)
N.D.
-5.0
+0.0
+0.1
+0.2
stress
Chlorite 1 mM
N.D.
-4.8
-0.2
+0.4
-0.0
motility
outer cut, LB soft agar motility assay
N.D.
-4.6
+0.2
-0.0
+0.0
motility
inner cut, LB soft agar motility assay
N.D.
-4.4
-0.0
+0.2
-0.1
stress
Cobalt chloride 0.3 mM
N.D.
-4.8
+0.1
-0.1
+0.4
stress
Cobalt chloride 0.2 mM
N.D.
-4.6
+0.2
+0.4
-0.3
stress
Nickel (II) chloride 0.5 mM
N.D.
-3.6
+0.0
-0.6
+0.0
stress
copper (II) chloride 2 mM
N.D.
-5.1
+0.1
+0.8
+0.0
nitrogen source
L-Glutamic (N)
N.D.
-2.7
-0.3
-0.2
-0.5
nitrogen source
Parabanic Acid (N)
N.D.
-2.9
+0.1
-0.4
+0.3
nitrogen source
Cytosine (N)
N.D.
-3.1
-0.0
+1.1
-0.2
carbon source
D-Lactate (C)
N.D.
-2.7
-0.0
+0.7
-0.1
carbon source
succinate (C)
N.D.
-2.9
+0.1
+0.7
-0.0
nitrogen source
L-Phenylalanine (N)
N.D.
-2.8
+0.1
+0.6
+0.0
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AZOBR_RS03245
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