Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS03215 and AZOBR_RS03220 are separated by 113 nucleotidesAZOBR_RS03220 and AZOBR_RS03225 are separated by 91 nucleotidesAZOBR_RS03225 and AZOBR_RS03230 are separated by 1260 nucleotidesAZOBR_RS03230 and AZOBR_RS03235 are separated by 27 nucleotides AZOBR_RS03215: AZOBR_RS03215 - hypothetical protein, at 682,892 to 683,377 _RS03215 AZOBR_RS03220: AZOBR_RS03220 - 3-dehydroquinate synthase, at 683,491 to 684,627 _RS03220 AZOBR_RS03225: AZOBR_RS03225 - shikimate kinase, at 684,719 to 685,207 _RS03225 AZOBR_RS03230: AZOBR_RS03230 - hypothetical protein, at 686,468 to 687,238 _RS03230 AZOBR_RS03235: AZOBR_RS03235 - hypothetical protein, at 687,266 to 687,667 _RS03235
Group Condition AZOBR_RS03215 AZOBR_RS03220 AZOBR_RS03225 AZOBR_RS03230 AZOBR_RS03235
stress Paraquat dichloride 0.02 mg/ml -4.5 N.D. N.D. N.D. N.D.
stress Sisomicin 0.01 mg/ml -4.5 N.D. N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) -3.1 N.D. N.D. N.D. N.D.
nitrogen source D-Alanine (N) -3.0 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.2 N.D. N.D. N.D. N.D.
anaerobic; rich media LB; anaerobic -2.2 N.D. N.D. N.D. N.D.
stress D-Cycloserine 0.125 mg/ml -2.1 N.D. N.D. N.D. N.D.
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -1.9 N.D. N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 N.D. N.D. N.D. N.D.
nitrogen source Glucuronamide (N) -1.8 N.D. N.D. N.D. N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.8 N.D. N.D. N.D. N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.7 N.D. N.D. N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.7 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 N.D. N.D. N.D. N.D.
stress Chlorite 1 mM -1.6 N.D. N.D. N.D. N.D.
nitrogen source L-Phenylalanine (N) -1.5 N.D. N.D. N.D. N.D.
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -1.4 N.D. N.D. N.D. N.D.
motility outer cut, LB soft agar motility assay -1.4 N.D. N.D. N.D. N.D.
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.3 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 N.D. N.D. N.D. N.D.
nitrogen source L-Histidine (N) -1.2 N.D. N.D. N.D. N.D.
nitrogen source Parabanic Acid (N) +1.2 N.D. N.D. N.D. N.D.
stress 2-pentyl-furan 1.780666667 mM +1.2 N.D. N.D. N.D. N.D.
stress 2-Furfuraldehyde 0.2 vol% +1.3 N.D. N.D. N.D. N.D.
stress 3-octanone 6.3476 mM +1.3 N.D. N.D. N.D. N.D.
nitrogen source L-Glutamic (N) +1.5 N.D. N.D. N.D. N.D.
stress Benzethonium chloride 0.003 mM +1.8 N.D. N.D. N.D. N.D.
nitrogen source L-Isoleucine (N) +1.9 N.D. N.D. N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +2.1 N.D. N.D. N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +2.6 N.D. N.D. N.D. N.D.
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