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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS02925 and AZOBR_RS02930 are separated by 131 nucleotides
AZOBR_RS02930 and AZOBR_RS02935 are separated by 218 nucleotides
AZOBR_RS02935 and AZOBR_RS02940 overlap by 1 nucleotides
AZOBR_RS02940 and AZOBR_RS02945 are separated by 117 nucleotides
AZOBR_RS02925: AZOBR_RS02925 - SAM-dependent methyltransferase PhcB, at 620,300 to 620,920
_RS02925
AZOBR_RS02930: AZOBR_RS02930 - hypothetical protein, at 621,052 to 621,579
_RS02930
AZOBR_RS02935: AZOBR_RS02935 - small component of pyruvate transporter (yjcH-like)
(from data)
, at 621,798 to 622,100
_RS02935
AZOBR_RS02940: AZOBR_RS02940 - large component of pyruvate transporter (actP-like)
(from data)
, at 622,100 to 623,818
_RS02940
AZOBR_RS02945: AZOBR_RS02945 - hypothetical protein, at 623,936 to 625,753
_RS02945
Group
Condition
AZOBR
_RS02925
AZOBR
_RS02930
AZOBR
_RS02935
AZOBR
_RS02940
AZOBR
_RS02945
carbon source
pyruvate (C)
-0.1
-0.1
-3.8
-3.7
+0.1
carbon source
pyruvate (C)
-0.1
-0.2
-3.0
-3.4
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-2.9
-0.6
-0.3
-0.2
-0.4
carbon source
D-Gluconic Acid (C)
-2.6
-0.7
-0.2
-0.1
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-3.9
+0.3
+0.1
+0.2
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-3.9
-0.0
+0.5
+0.2
-0.3
anaerobic; rich media
LB; anaerobic
-0.2
-0.3
-0.8
-1.0
-0.1
stress
3-octanone 6.3476 mM
+0.4
-0.8
-0.5
-0.5
-0.4
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
-0.2
-0.1
+0.3
-0.2
-1.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
-0.3
-0.3
+0.0
-1.2
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
-0.2
-0.3
-0.7
-0.6
+0.4
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-0.9
+0.2
+0.3
-0.1
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
-0.9
+0.5
+0.3
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.9
+0.3
+0.4
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.7
+0.4
+0.3
-0.5
stress
nitrite 10 mM
-0.8
-0.4
+0.4
+0.4
+0.2
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-0.3
+0.9
+0.5
-0.0
-0.8
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.5
+0.2
+0.9
+0.3
-0.5
stress
Chlorite 1 mM
-0.7
-0.2
+0.6
+0.7
+0.0
motility
inner cut, LB soft agar motility assay
-0.7
-0.6
+1.2
+1.1
-0.0
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.2
+0.7
+0.5
+0.6
-0.4
motility
outer cut, LB soft agar motility assay
+0.1
+0.7
+0.5
+0.6
-0.7
stress
Cobalt chloride 0.2 mM
-0.4
+0.4
+0.8
+0.5
-0.0
stress
Sisomicin 0.01 mg/ml
-0.5
-0.5
+0.8
+1.0
+0.5
lb
LB
-0.2
-0.3
+0.9
+1.1
-0.2
motility
inner cut, LB soft agar motility assay
+0.4
-0.2
+0.7
+0.9
-0.4
stress
Paraquat dichloride 0.04 mg/ml
-0.4
-0.1
+1.0
+0.9
+0.2
motility
inner cut, LB soft agar motility assay
+1.0
-0.4
+0.7
+0.8
-0.1
lb
LB
-0.9
-0.1
+1.6
+1.7
+0.1
stress
Paraquat dichloride 0.02 mg/ml
+0.6
+0.4
+0.9
+1.1
-0.1
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