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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS02460 and AZOBR_RS02465 are separated by 221 nucleotides
AZOBR_RS02465 and AZOBR_RS02470 are separated by 321 nucleotides
AZOBR_RS02470 and AZOBR_RS02475 are separated by 48 nucleotides
AZOBR_RS02475 and AZOBR_RS02485 are separated by 3833 nucleotides
AZOBR_RS02460: AZOBR_RS02460 - phospholipase, at 509,100 to 511,259
_RS02460
AZOBR_RS02465: AZOBR_RS02465 - endonuclease, at 511,481 to 512,191
_RS02465
AZOBR_RS02470: AZOBR_RS02470 - esterase, at 512,513 to 513,733
_RS02470
AZOBR_RS02475: AZOBR_RS02475 - heme A synthase, at 513,782 to 514,867
_RS02475
AZOBR_RS02485: AZOBR_RS02485 - muraminidase, at 518,701 to 519,192
_RS02485
Group
Condition
AZOBR
_RS02460
AZOBR
_RS02465
AZOBR
_RS02470
AZOBR
_RS02475
AZOBR
_RS02485
stress
Cobalt chloride 0.2 mM
-0.4
-0.7
+0.2
+0.0
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
-0.4
+0.0
-1.2
-0.0
stress
2-pentyl-furan 1.780666667 mM
-0.2
+0.1
+0.1
-0.8
-0.3
nitrogen source
L-Isoleucine (N)
-1.0
-0.1
-0.2
-0.1
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.0
+0.2
-0.3
-0.8
-0.0
stress
2-pentyl-furan 1.335528 mM
-0.1
+0.2
-0.0
-0.9
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.1
-0.5
-0.7
+0.5
stress
Chlorite 1 mM
-0.3
-0.4
+0.2
-0.3
+0.1
stress
2-pentyl-furan 1.335528 mM
-0.1
+0.3
+0.2
-0.7
-0.4
stress
2-pentyl-furan 1.335528 mM
-0.1
-0.2
-0.1
-0.6
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
-0.5
-0.4
-0.4
+0.3
lb
LB
-0.5
-0.1
+0.0
+0.5
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.3
+0.1
-0.8
+0.2
stress
1-octen-3-ol 0.6030326667 mM
+0.1
+0.3
+0.2
-0.3
-0.5
nitrogen source
L-Phenylalanine (N)
+0.3
+0.5
-0.0
+0.0
-0.7
motility
inner cut, LB soft agar motility assay
+0.1
-0.1
-0.2
+0.6
-0.3
lb
LB
+0.2
-0.4
+0.1
+0.5
-0.3
stress
Sisomicin 0.01 mg/ml
-0.2
-0.3
-0.2
+0.4
+0.4
carbon source
butyrate (C)
+0.2
+0.4
+0.3
-0.5
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.1
+0.2
-0.3
+0.7
carbon source
a-Ketoglutaric (C)
-0.1
-0.2
-0.2
+0.9
+0.1
carbon source
L-Glutamine (C)
+0.2
+0.5
+0.1
-0.4
+0.1
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-0.4
+0.8
+0.4
+0.2
-0.4
nitrogen source
L-Glutamic (N)
-0.6
+0.0
+0.3
+0.5
+0.4
nitrogen source
Parabanic Acid (N)
+0.1
+0.5
-0.0
+0.6
-0.2
nitrogen source
Parabanic Acid (N)
+0.1
+0.1
+0.1
+0.9
-0.3
carbon source
Glycerol (C)
-0.1
+0.0
-0.0
+1.1
-0.0
motility
inner cut, LB soft agar motility assay
-0.1
+0.4
+0.3
+0.3
+0.2
carbon source
Glycerol (C)
+0.2
+0.6
+0.2
+0.7
-0.2
nitrogen source
Cytosine (N)
+0.2
+0.7
+0.1
+0.7
+0.1
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