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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS02080 and AZOBR_RS02085 are separated by 134 nucleotides
AZOBR_RS02085 and AZOBR_RS02095 are separated by 1644 nucleotides
AZOBR_RS02095 and AZOBR_RS02100 are separated by 111 nucleotides
AZOBR_RS02100 and AZOBR_RS02105 are separated by 681 nucleotides
AZOBR_RS02080: AZOBR_RS02080 - multidrug transporter MurJ, at 424,188 to 425,762
_RS02080
AZOBR_RS02085: AZOBR_RS02085 - histidine kinase, at 425,897 to 428,401
_RS02085
AZOBR_RS02095: AZOBR_RS02095 - hypothetical protein, at 430,046 to 430,396
_RS02095
AZOBR_RS02100: AZOBR_RS02100 - pirin, at 430,508 to 431,440
_RS02100
AZOBR_RS02105: AZOBR_RS02105 - hypothetical protein, at 432,122 to 432,700
_RS02105
Group
Condition
AZOBR
_RS02080
AZOBR
_RS02085
AZOBR
_RS02095
AZOBR
_RS02100
AZOBR
_RS02105
nitrogen source
L-Glutamic (N)
+0.3
+0.1
-0.2
-0.1
-5.3
stress
2-pentyl-furan 1.780666667 mM
-4.0
+0.0
-0.2
-0.0
-0.4
stress
Paraquat dichloride 0.02 mg/ml
+0.2
+0.2
-0.1
+0.2
-4.1
stress
Bacitracin 0.25 mg/ml
-3.6
+0.0
-0.1
+0.1
-0.0
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-1.1
-0.7
-0.1
-0.1
-1.4
stress
2-pentyl-furan 1.335528 mM
-2.2
-0.1
-0.3
-0.1
-0.7
nitrogen source
D-Alanine (N)
-2.6
-0.3
-0.1
-0.0
-0.1
stress
Vancomycin 0.03 mg/ml
-2.2
-0.1
+0.1
+0.2
-0.1
stress
2-pentyl-furan 1.335528 mM
-2.1
-0.0
+0.0
-0.2
+0.2
nitrogen source
L-Aspartic Acid (N)
-1.3
-0.1
-0.1
-0.0
-0.4
stress
2-pentyl-furan 1.335528 mM
-1.5
+0.0
-0.3
+0.0
-0.2
stress
2-pentyl-furan 1.780666667 mM
-2.0
+0.3
-0.2
-0.2
+0.2
stress
2-pentyl-furan 1.780666667 mM
-2.1
-0.0
-0.1
+0.0
+0.4
stress
2-pentyl-furan 1.335528 mM
-0.1
+0.1
-0.7
-0.1
-1.1
nitrogen source
L-Aspartic Acid (N)
-1.7
+0.0
-0.1
-0.4
+0.5
nitrogen source
D-Alanine (N)
-1.6
+0.1
-0.0
+0.1
+0.3
stress
D-Cycloserine 0.125 mg/ml
+0.7
+0.1
+0.2
+0.0
-1.9
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-0.9
-0.3
-0.3
+0.1
+0.6
stress
2-pentyl-furan 2.671 mM
+0.2
+0.3
+0.6
+0.2
-1.5
stress
Cobalt chloride 0.2 mM
+0.7
-0.2
+0.2
-0.3
-0.7
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
+0.8
-0.1
+0.3
-0.2
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+1.0
-0.1
-0.1
+0.1
-0.6
stress
2-Furfuraldehyde 0.2 vol%
-0.1
+0.3
-0.6
-0.3
+1.0
stress
3-octanone 6.3476 mM
+1.2
-0.1
+0.1
+0.1
-0.8
motility
outer cut, LB soft agar motility assay
+0.3
+0.2
-0.5
-0.3
+0.9
motility
inner cut, LB soft agar motility assay
+0.8
-0.4
-0.1
+0.2
+0.5
motility
inner cut, LB soft agar motility assay
+0.6
+0.1
-0.0
-0.5
+0.8
stress
Paraquat dichloride 0.04 mg/ml
-0.1
+0.4
-0.5
+0.0
+1.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.4
-0.1
+0.0
+1.5
nitrogen source
L-Histidine (N)
+0.0
+0.2
-0.2
+0.0
+1.6
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