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Gene
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Cofit
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS01690 and AZOBR_RS01695 are separated by 30 nucleotides
AZOBR_RS01695 and AZOBR_RS01700 are separated by 171 nucleotides
AZOBR_RS01700 and AZOBR_RS01705 are separated by 120 nucleotides
AZOBR_RS01705 and AZOBR_RS01710 are separated by 13 nucleotides
AZOBR_RS01690: AZOBR_RS01690 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
(from data)
, at 345,775 to 346,116
_RS01690
AZOBR_RS01695: AZOBR_RS01695 - hypothetical protein, at 346,147 to 346,515
_RS01695
AZOBR_RS01700: AZOBR_RS01700 - hypothetical protein, at 346,687 to 347,484
_RS01700
AZOBR_RS01705: AZOBR_RS01705 - murein transglycosylase, at 347,605 to 348,810
_RS01705
AZOBR_RS01710: AZOBR_RS01710 - translocase, at 348,824 to 349,498
_RS01710
Group
Condition
AZOBR
_RS01690
AZOBR
_RS01695
AZOBR
_RS01700
AZOBR
_RS01705
AZOBR
_RS01710
carbon source
L-Malic (C)
-6.8
-0.1
+0.1
-0.8
N.D.
carbon source
D,L-Lactate (C)
-6.4
-0.6
-0.1
-0.4
N.D.
carbon source
D-Fructose (C)
-6.9
-0.0
+0.1
-0.3
N.D.
nitrogen source
Urea (N)
-6.0
-0.4
-0.4
-0.3
N.D.
carbon source
D-Fructose (C)
-6.7
-0.1
-0.0
-0.3
N.D.
nitrogen source
L-Citrulline (N)
-5.8
-0.5
-0.4
-0.3
N.D.
nitrogen source
D-Alanine (N)
-6.5
-0.1
-0.1
-0.3
N.D.
carbon source
L-Proline (C)
-6.2
+0.0
-0.5
-0.3
N.D.
nitrogen source
L-Citrulline (N)
-6.0
-0.3
+0.0
-0.7
N.D.
carbon source
L-Leucine (C)
-6.4
-0.5
+0.1
-0.1
N.D.
carbon source
pyruvate (C)
-6.1
-0.1
-0.2
-0.4
N.D.
nitrogen source
L-Asparagine (N)
-6.0
-0.4
+0.1
-0.5
N.D.
carbon source
succinate (C)
-5.7
-0.8
+0.0
-0.1
N.D.
carbon source
D-Lactate (C)
-6.1
-0.1
-0.1
-0.4
N.D.
carbon source
pyruvate (C)
-6.0
-0.1
+0.1
-0.6
N.D.
nitrogen source
L-Lysine (N)
-5.9
-0.1
-0.3
-0.2
N.D.
carbon source
L-Malic (C)
-5.8
-0.1
-0.2
-0.4
N.D.
nitrogen source
L-Asparagine (N)
-5.9
-0.1
-0.3
-0.1
N.D.
carbon source
L-Proline (C)
-6.0
-0.0
-0.1
-0.3
N.D.
nitrogen source
Ammonium chloride (N)
-6.0
+0.1
-0.0
-0.4
N.D.
carbon source
succinate (C)
-5.8
+0.2
-0.2
-0.3
N.D.
nitrogen source
D-Alanine (N)
-5.5
-0.4
+0.2
-0.4
N.D.
carbon source
D-Lactate (C)
-5.6
-0.1
-0.2
-0.2
N.D.
nitrogen source
nitrate (N)
-5.5
-0.2
-0.1
-0.2
N.D.
nitrogen source
Urea (N)
-5.7
+0.0
-0.1
-0.2
N.D.
carbon source
D,L-Lactate (C)
-5.5
-0.1
+0.1
-0.2
N.D.
nitrogen source
L-Aspartic Acid (N)
-5.4
+0.1
-0.3
-0.2
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
-5.6
+0.6
-0.2
-0.1
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-5.4
+0.9
+0.1
+0.2
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
-4.5
+1.0
+0.2
+0.2
N.D.
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