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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS01375 and AZOBR_RS01380 are separated by 461 nucleotides
AZOBR_RS01380 and AZOBR_RS01385 are separated by 227 nucleotides
AZOBR_RS01385 and AZOBR_RS01390 are separated by 298 nucleotides
AZOBR_RS01390 and AZOBR_RS01400 are separated by 944 nucleotides
AZOBR_RS01375: AZOBR_RS01375 - hypothetical protein, at 285,173 to 285,685
_RS01375
AZOBR_RS01380: AZOBR_RS01380 - hypothetical protein, at 286,147 to 286,452
_RS01380
AZOBR_RS01385: AZOBR_RS01385 - polynucleotide phosphorylase, at 286,680 to 288,800
_RS01385
AZOBR_RS01390: AZOBR_RS01390 - 30S ribosomal protein S15, at 289,099 to 289,368
_RS01390
AZOBR_RS01400: AZOBR_RS01400 - ribosome-binding factor A, at 290,313 to 290,897
_RS01400
Group
Condition
AZOBR
_RS01375
AZOBR
_RS01380
AZOBR
_RS01385
AZOBR
_RS01390
AZOBR
_RS01400
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-0.1
N.D.
N.D.
N.D.
-3.0
stress
D-Cycloserine 0.125 mg/ml
+0.0
N.D.
N.D.
N.D.
-2.7
stress
Chlorite 1 mM
-0.6
N.D.
N.D.
N.D.
-1.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
N.D.
N.D.
N.D.
-1.8
stress
3-octanone 6.3476 mM
-0.7
N.D.
N.D.
N.D.
-0.9
stress
3-octanone 6.3476 mM
-0.1
N.D.
N.D.
N.D.
-1.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
N.D.
N.D.
N.D.
-0.9
stress
3-octanone 6.3476 mM
-0.9
N.D.
N.D.
N.D.
-0.4
nitrogen source
Urea (N)
+0.2
N.D.
N.D.
N.D.
-1.5
nitrogen source
L-Citrulline (N)
-0.4
N.D.
N.D.
N.D.
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
N.D.
N.D.
N.D.
-1.1
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-0.7
N.D.
N.D.
N.D.
-0.4
carbon source
succinate (C)
-0.3
N.D.
N.D.
N.D.
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.9
N.D.
N.D.
N.D.
-0.1
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.2
N.D.
N.D.
N.D.
-0.8
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
+0.3
N.D.
N.D.
N.D.
-1.2
stress
Vancomycin 0.03 mg/ml
+0.0
N.D.
N.D.
N.D.
-1.0
stress
Bacitracin 0.25 mg/ml
+0.4
N.D.
N.D.
N.D.
-1.1
motility
inner cut, LB soft agar motility assay
-1.0
N.D.
N.D.
N.D.
+0.3
motility
inner cut, LB soft agar motility assay
+0.3
N.D.
N.D.
N.D.
-0.9
stress
nitrate 100 mM
+0.7
N.D.
N.D.
N.D.
-1.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
N.D.
N.D.
N.D.
-0.7
carbon source
D-Gluconic Acid (C)
-0.7
N.D.
N.D.
N.D.
+0.5
stress
2-pentyl-furan 2.671 mM
-0.7
N.D.
N.D.
N.D.
+0.6
stress
Thallium(I) acetate 0.008 mg/ml
-0.4
N.D.
N.D.
N.D.
+0.8
stress
Paraquat dichloride 0.02 mg/ml
-0.5
N.D.
N.D.
N.D.
+1.0
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.4
N.D.
N.D.
N.D.
+0.6
lb
LB
+0.7
N.D.
N.D.
N.D.
+0.4
stress
Nickel (II) chloride 0.5 mM
-0.0
N.D.
N.D.
N.D.
+1.6
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.7
N.D.
N.D.
N.D.
+1.2
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