Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS01300 and AZOBR_RS01305 are separated by 148 nucleotidesAZOBR_RS01305 and AZOBR_RS01310 are separated by 93 nucleotidesAZOBR_RS01310 and AZOBR_RS01315 are separated by 299 nucleotidesAZOBR_RS01315 and AZOBR_RS01320 are separated by 58 nucleotides AZOBR_RS01300: AZOBR_RS01300 - peptide ABC transporter substrate-binding protein, at 269,287 to 271,095 _RS01300 AZOBR_RS01305: AZOBR_RS01305 - inorganic pyrophosphatase, at 271,244 to 271,801 _RS01305 AZOBR_RS01310: AZOBR_RS01310 - lactate dehydrogenase, at 271,895 to 272,836 _RS01310 AZOBR_RS01315: AZOBR_RS01315 - GCN5 family N-acetyltransferase, at 273,136 to 275,820 _RS01315 AZOBR_RS01320: AZOBR_RS01320 - hypothetical protein, at 275,879 to 276,451 _RS01320
Group Condition AZOBR_RS01300 AZOBR_RS01305 AZOBR_RS01310 AZOBR_RS01315 AZOBR_RS01320
stress Sisomicin 0.01 mg/ml +0.0 N.D. -5.1 +0.0 -5.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 N.D. -3.0 -0.0 -0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.0 N.D. -1.5 -0.4 -1.2
lb LB +0.0 N.D. -0.2 -0.0 -2.7
carbon source D-Gluconic Acid (C) -0.2 N.D. -0.1 -0.9 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 N.D. -2.7 +0.5 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 N.D. -4.4 +0.2 +1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 N.D. -0.1 +0.4 -2.4
motility inner cut, LB soft agar motility assay +0.0 N.D. +0.4 -0.6 -2.1
nitrogen source L-Asparagine (N) +0.0 N.D. +0.0 +0.0 -2.3
motility inner cut, LB soft agar motility assay -0.4 N.D. +0.8 +0.2 -2.6
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.0 N.D. +0.9 -1.8 -1.0
stress 2-pentyl-furan 2.671 mM -0.1 N.D. -0.8 +0.3 -1.0
nitrogen source L-Threonine (N) -0.1 N.D. +0.6 +0.1 -1.8
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.2 N.D. +1.1 -1.8 -0.3
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days +0.2 N.D. +0.8 -1.8 +0.1
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days +0.1 N.D. +0.6 -1.5 +0.2
motility inner cut, LB soft agar motility assay +0.1 N.D. +1.0 -0.2 -1.5
nitrogen fixation L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days +0.1 N.D. +0.7 -1.5 +0.2
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.2 N.D. +1.2 -1.7 -0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.3 N.D. +0.7 -1.5 +0.2
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.1 N.D. +1.0 -1.9 +0.8
stress 3-octanone 6.3476 mM +0.1 N.D. -0.5 -0.5 +1.0
nitrogen fixation L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days +0.3 N.D. +1.6 -1.5 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 N.D. +1.3 +0.2 -0.6
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.1 N.D. +1.5 -1.0 +0.2
anaerobic; rich media LB; anaerobic +0.0 N.D. +1.2 -0.6 +0.4
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.3 N.D. +1.4 -0.3 +0.7
nitrogen source L-Glutamic (N) -0.0 N.D. +0.4 +0.2 +1.6
stress D-Cycloserine 0.125 mg/ml +0.1 N.D. +1.0 +0.6 +0.5
remove
AZOBR_RS01300
plot
remove
AZOBR_RS01305
plot
remove
AZOBR_RS01310
remove
AZOBR_RS01315
plot
remove
AZOBR_RS01320
plot