Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS00900 and AZOBR_RS00905 are separated by 21 nucleotidesAZOBR_RS00905 and AZOBR_RS00910 are separated by 179 nucleotidesAZOBR_RS00910 and AZOBR_RS00915 are separated by 69 nucleotidesAZOBR_RS00915 and AZOBR_RS00920 are separated by 399 nucleotides AZOBR_RS00900: AZOBR_RS00900 - 50S ribosomal protein L20, at 180,553 to 180,924 _RS00900 AZOBR_RS00905: AZOBR_RS00905 - 50S ribosomal protein L35, at 180,946 to 181,146 _RS00905 AZOBR_RS00910: AZOBR_RS00910 - proline iminopeptidase, at 181,326 to 182,276 _RS00910 AZOBR_RS00915: AZOBR_RS00915 - nuclease, at 182,346 to 183,182 _RS00915 AZOBR_RS00920: AZOBR_RS00920 - peptidase, at 183,582 to 184,904 _RS00920
Group Condition AZOBR_RS00900 AZOBR_RS00905 AZOBR_RS00910 AZOBR_RS00915 AZOBR_RS00920
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.8 N.D. -0.0
stress D-Cycloserine 0.125 mg/ml N.D. N.D. -0.8 N.D. -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.4 N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.6 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.6 N.D. -0.1
stress Cobalt chloride 0.2 mM N.D. N.D. -0.1 N.D. -0.5
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days N.D. N.D. -0.6 N.D. +0.2
nitrogen fixation L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days N.D. N.D. -0.6 N.D. +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.5 N.D. +0.3
motility inner cut, LB soft agar motility assay N.D. N.D. +0.6 N.D. -0.1
nitrogen source Urea (N) N.D. N.D. +0.3 N.D. +0.3
carbon source L-Malic (C) N.D. N.D. +0.3 N.D. +0.3
carbon source D-Lactate (C) N.D. N.D. +0.3 N.D. +0.3
nitrogen source Cytosine (N) N.D. N.D. +0.5 N.D. +0.1
carbon source D,L-Lactate (C) N.D. N.D. +0.3 N.D. +0.4
carbon source L-Proline (C) N.D. N.D. +0.3 N.D. +0.4
nitrogen source nitrate (N) N.D. N.D. +0.3 N.D. +0.3
nitrogen source L-Aspartic Acid (N) N.D. N.D. +0.2 N.D. +0.5
nitrogen source casaminos (N) N.D. N.D. +0.3 N.D. +0.4
nitrogen source nitrate (N) N.D. N.D. +0.5 N.D. +0.2
carbon source L-Lactate (C) N.D. N.D. +0.3 N.D. +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. +0.6 N.D. +0.2
nitrogen source L-Lysine (N) N.D. N.D. +0.4 N.D. +0.3
carbon source L-Glutamine (C) N.D. N.D. +0.4 N.D. +0.4
nitrogen source Ammonium chloride (N) N.D. N.D. +0.5 N.D. +0.3
carbon source Glycerol (C) N.D. N.D. +0.3 N.D. +0.5
nitrogen source D-Alanine (N) N.D. N.D. +0.3 N.D. +0.5
nitrogen source L-Histidine (N) N.D. N.D. +0.4 N.D. +0.5
nitrogen source L-Threonine (N) N.D. N.D. +0.7 N.D. +0.7
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days N.D. N.D. +1.0 N.D. +0.6
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