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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS00205 and AZOBR_RS00210 are separated by 346 nucleotides
AZOBR_RS00210 and AZOBR_RS00215 are separated by 345 nucleotides
AZOBR_RS00215 and AZOBR_RS00220 are separated by 81 nucleotides
AZOBR_RS00220 and AZOBR_RS00225 are separated by 121 nucleotides
AZOBR_RS00205: AZOBR_RS00205 - hypothetical protein, at 34,350 to 34,592
_RS00205
AZOBR_RS00210: AZOBR_RS00210 - hypothetical protein, at 34,939 to 35,442
_RS00210
AZOBR_RS00215: AZOBR_RS00215 - MFS transporter, at 35,788 to 37,098
_RS00215
AZOBR_RS00220: AZOBR_RS00220 - hypothetical protein, at 37,180 to 37,431
_RS00220
AZOBR_RS00225: AZOBR_RS00225 - purine biosynthesis protein purH, at 37,553 to 39,157
_RS00225
Group
Condition
AZOBR
_RS00205
AZOBR
_RS00210
AZOBR
_RS00215
AZOBR
_RS00220
AZOBR
_RS00225
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.4
-0.7
N.D.
N.D.
stress
Cobalt chloride 0.2 mM
N.D.
-0.5
-0.4
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
N.D.
-0.1
-0.6
N.D.
N.D.
stress
Chlorite 1 mM
N.D.
-0.1
-0.6
N.D.
N.D.
nitrogen source
casaminos (N)
N.D.
-0.8
+0.1
N.D.
N.D.
stress
2-pentyl-furan 1.335528 mM
N.D.
-0.1
-0.5
N.D.
N.D.
lb
LB
N.D.
+0.2
-0.6
N.D.
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
N.D.
+0.2
-0.5
N.D.
N.D.
stress
2-pentyl-furan 2.671 mM
N.D.
-0.5
+0.3
N.D.
N.D.
nitrogen source
L-Glutamic (N)
N.D.
-0.4
+0.4
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-0.5
+0.6
N.D.
N.D.
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.4
+0.5
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.3
+0.5
N.D.
N.D.
nitrogen source
casaminos (N)
N.D.
-0.3
+0.5
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
N.D.
-0.4
+0.6
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-0.2
+0.5
N.D.
N.D.
nitrogen source
L-Threonine (N)
N.D.
-0.1
+0.5
N.D.
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
-0.1
+0.6
N.D.
N.D.
nitrogen source
D-Alanine (N)
N.D.
-0.1
+0.6
N.D.
N.D.
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
N.D.
-0.1
+0.6
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.2
+0.8
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
N.D.
+0.0
+0.6
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
-0.1
+0.7
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
N.D.
+0.1
+0.6
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.1
+0.8
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.3
+0.4
N.D.
N.D.
nitrogen source
L-Lysine (N)
N.D.
+0.2
+0.6
N.D.
N.D.
carbon source
L-Lactate (C)
N.D.
+0.2
+0.6
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
+0.2
+0.6
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
+0.3
+0.8
N.D.
N.D.
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