Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_30220 and AO356_30225 are separated by 72 nucleotidesAO356_30225 and AO356_30230 are separated by 16 nucleotidesAO356_30230 and AO356_30235 are separated by 189 nucleotidesAO356_30235 and AO356_30240 are separated by 315 nucleotides AO356_30220: AO356_30220 - aldehyde dehydrogenase, at 7,053,622 to 7,055,073 _30220 AO356_30225: AO356_30225 - choline dehydrogenase, at 7,055,146 to 7,056,786 _30225 AO356_30230: AO356_30230 - transmembrane reductase oxidoreductase, at 7,056,803 to 7,057,477 _30230 AO356_30235: AO356_30235 - LysR family transcriptional regulator, at 7,057,667 to 7,058,560 _30235 AO356_30240: AO356_30240 - transcriptional regulator, at 7,058,876 to 7,060,006 _30240
Group Condition AO356_30220 AO356_30225 AO356_30230 AO356_30235 AO356_30240
stress KB-half, Pseudo5 supernatant -0.1 -0.2 -0.7 -0.1 -0.2
carbon source m-Inositol (C) -0.1 -0.2 -0.2 -0.2 -0.3
carbon source L-Malic (C) -0.2 -0.2 -0.2 -0.1 -0.2
carbon source L-Histidine (C) -0.0 -0.2 -0.3 -0.3 -0.1
pH Minimal media pH6 -0.1 -0.2 -0.4 -0.3 -0.0
carbon source L-Histidine (C) -0.1 -0.1 -0.5 -0.2 -0.0
carbon source casaminos (C) -0.1 -0.1 -0.3 -0.3 -0.1
carbon source L-Lysine (C) -0.3 -0.1 -0.4 +0.0 -0.1
pH Minimal media pH9 -0.1 -0.2 -0.4 -0.1 +0.0
survival 4C survival; 24 hrs -0.1 -0.1 -0.3 -0.2 -0.2
carbon source L-Alanine (C) -0.0 -0.1 -0.6 -0.0 -0.1
carbon source Carbon source D-Mannitol 5 mM +0.1 -0.0 -0.5 -0.2 -0.0
stress Sisomicin 0.001 mg/ml -0.1 -0.3 +0.1 -0.1 -0.3
carbon source Carbon source Sucrose 10 mM +0.0 -0.0 -0.6 +0.0 -0.0
survival 4C survival; 360 hrs -0.0 -0.2 -0.2 -0.3 +0.1
carbon source a-Ketoglutaric (C) -0.2 -0.1 +0.1 -0.2 -0.3
carbon source D-Glucosamine Hydrochloride (C) +0.1 -0.0 -0.3 -0.3 -0.0
carbon source Carbon source D-Mannitol 5 mM -0.1 +0.2 -0.2 -0.0 -0.3
carbon source pyruvate (C) -0.1 -0.2 +0.1 -0.1 -0.3
anaerobic Nitrate reduction with yeast extract -0.1 -0.3 -0.1 +0.3 -0.2
stress Vanillin 1.25 mM +0.2 -0.1 -0.5 +0.1 -0.0
stress perchlorate 75 mM -0.2 -0.1 +0.3 -0.2 +0.0
carbon source D-Fructose (C) -0.1 -0.1 +0.3 -0.1 -0.2
stress Rifampicin 0.0024 mg/ml -0.1 +0.2 -0.3 -0.1 +0.1
carbon source Carbon source Sucrose 10 mM +0.2 +0.1 -0.3 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.3 +0.1 -0.5 +0.1 +0.0
motility outer cut, LB soft agar motility assay -0.1 +0.3 +0.1 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.2 +0.1 -0.2 -0.1 +0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.5 +0.1 +0.3 +0.4 +0.0
carbon source Fumarate (C) +0.1 +0.1 +0.2 +0.3 -0.2
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