Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_30155 and AO356_30160 are separated by 383 nucleotidesAO356_30160 and AO356_30165 are separated by 975 nucleotidesAO356_30165 and AO356_30170 are separated by 459 nucleotidesAO356_30170 and AO356_30175 overlap by 4 nucleotides AO356_30155: AO356_30155 - hypothetical protein, at 7,038,140 to 7,038,901 _30155 AO356_30160: AO356_30160 - hypothetical protein, at 7,039,285 to 7,039,632 _30160 AO356_30165: AO356_30165 - hypothetical protein, at 7,040,608 to 7,041,681 _30165 AO356_30170: AO356_30170 - cytochrome B, at 7,042,141 to 7,042,719 _30170 AO356_30175: AO356_30175 - caspase, at 7,042,716 to 7,043,798 _30175
Group Condition AO356_30155 AO356_30160 AO356_30165 AO356_30170 AO356_30175
motility outer cut, LB soft agar motility assay -0.3 -0.0 -0.3 -1.2 +0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 -0.0 -0.6 -0.8 +0.1
lb LB -0.2 -0.2 -0.2 -0.2 -0.3
stress perchlorate 75 mM -0.3 -0.3 -0.3 +0.0 -0.2
stress nitrate 200 mM -0.1 -0.0 -0.1 -0.3 -0.4
carbon source Cytidine (C) +0.0 -0.1 -0.2 -0.4 -0.4
carbon source Putrescine (C) -0.1 +0.1 -0.0 -0.6 -0.4
carbon source acetate (C) -0.2 -0.2 +0.1 -0.1 -0.5
stress Lomefloxacin 0.0005 mM -0.1 +0.1 +0.0 -0.4 -0.4
survival 4C survival; 360 hrs +0.2 -0.3 -0.2 -0.1 -0.4
nitrogen source Carnitine Hydrochloride (N) -0.1 +0.2 -0.3 -0.2 -0.2
carbon source D-Lactate (C) -0.3 -0.2 -0.1 -0.2 +0.2
stress Benzalkonium Chloride 0.008 mg/ml +0.3 -0.0 -0.1 -0.5 -0.2
nitrogen source L-Isoleucine (N) -0.3 -0.1 -0.2 -0.3 +0.4
motility outer cut, LB soft agar motility assay -0.0 -0.6 -0.0 -0.0 +0.4
carbon source L-Alanine (C) -0.2 +0.1 -0.2 -0.3 +0.2
nitrogen source Gly-Glu (N) -0.1 -0.0 -0.2 -0.2 +0.4
stress Nickel (II) chloride 0.625 mM +0.3 -0.1 +0.2 -0.4 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.2 -0.2 -0.2 -0.1 +0.8
carbon source Carbon source D-Mannitol 5 mM +0.1 -0.1 +0.3 -0.3 +0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.3 -0.1 +0.3 +0.0 -0.3
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 -0.1 -0.1 -0.1 +0.6
carbon source D-Gluconic Acid (C) +0.3 -0.2 +0.2 -0.2 +0.2
temperature LB 37C +0.2 -0.2 +0.1 -0.1 +0.4
carbon source L-Lysine (C) -0.2 -0.1 -0.0 +0.7 +0.1
stress copper (II) chloride 2.5 mM +0.4 -0.1 +0.1 +0.5 -0.2
anaerobic Nitrate reduction with yeast extract +0.3 +0.3 -0.1 +0.5 -0.3
stress Cobalt chloride 0.08 mM -0.1 -0.0 +0.4 +0.3 +0.6
stress KB-half, Pseudo5 supernatant +0.4 +0.1 +0.2 +0.5 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.1 +0.1 +0.0 +0.4 +0.9
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