Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_30080 and AO356_30085 are separated by 72 nucleotidesAO356_30085 and AO356_30090 are separated by 281 nucleotidesAO356_30090 and AO356_30095 are separated by 239 nucleotidesAO356_30095 and AO356_30100 overlap by 4 nucleotides AO356_30080: AO356_30080 - amidophosphoribosyltransferase, at 7,020,492 to 7,021,397 _30080 AO356_30085: AO356_30085 - glutamine synthetase, at 7,021,470 to 7,022,804 _30085 AO356_30090: AO356_30090 - XRE family transcriptional regulator, at 7,023,086 to 7,023,685 _30090 AO356_30095: AO356_30095 - formyltetrahydrofolate deformylase, at 7,023,925 to 7,024,791 _30095 AO356_30100: AO356_30100 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase, at 7,024,788 to 7,025,693 _30100
Group Condition AO356_30080 AO356_30085 AO356_30090 AO356_30095 AO356_30100
stress sodium fluoride 6.25 mM -1.9 -0.2 -0.2 -0.3 +0.1
pH Minimal media pH8 -1.7 -0.0 -0.1 +0.1 -0.2
motility outer cut, LB soft agar motility assay -1.7 -0.3 +0.1 -0.3 +0.2
lb LB -0.5 -0.1 -0.1 -0.4 -0.4
carbon source Carbon source Sucrose 2.5 mM -1.0 -0.0 -0.3 -0.0 -0.2
carbon source Carbon source D-Mannitol 5 mM -0.8 -0.1 -0.4 -0.1 -0.2
carbon source L-Lysine (C) -1.4 +0.1 -0.2 +0.0 +0.0
motility outer cut, LB soft agar motility assay -1.7 -0.3 +0.1 +0.3 +0.2
carbon source Carbon source D,L-Lactate 10 mM -0.5 -0.0 -0.4 -0.2 -0.2
carbon source Carbon source D-Glucose 10 mM -1.0 +0.0 +0.0 -0.1 -0.3
stress syringaldehyde 10 mM -0.4 +0.0 -0.3 -0.1 -0.5
nitrogen source D-Glucosamine Hydrochloride (N) -0.6 +0.1 -0.4 -0.1 -0.2
carbon source L-Asparagine (C) -1.0 -0.1 -0.3 +0.2 -0.0
carbon source D-Galactose (C) -1.0 -0.1 -0.2 -0.1 +0.2
carbon source L-Lysine (C) -0.7 +0.1 -0.3 +0.2 -0.2
stress Chlorite 0.08 mM -0.4 +0.0 +0.2 -0.3 -0.4
temperature LB 30C +0.2 -0.2 -0.1 -0.6 -0.3
nitrogen source L-tyrosine (N) +0.4 +0.0 -0.9 -0.1 -0.4
carbon source Carbon source D-Mannitol 10 mM -0.8 +0.0 -0.1 +0.2 -0.3
stress methylglyoxal 0.016 vol% -0.5 +0.3 +0.0 -0.3 -0.5
carbon source L-Asparagine (C) -0.7 -0.2 -0.2 +0.3 -0.0
carbon source D-Glucose (C) -0.7 +0.1 -0.2 +0.1 +0.3
stress Thallium(I) acetate 0.008 mg/ml -0.5 +0.0 -0.2 -0.2 +0.4
motility outer cut, LB soft agar motility assay -0.0 +0.2 +0.4 +0.2 -1.0
nitrogen source Urea (N) -0.8 -0.3 +1.1 +0.0 -0.1
anaerobic Nitrate reduction with yeast extract +0.8 +0.1 +0.1 -0.5 -0.4
nitrogen source Inosine (N) -0.5 +0.0 +0.6 -0.2 +0.3
stress Nalidixic 0.004 mg/ml +0.9 -0.0 -0.2 -0.3 -0.2
nitrogen source D-Serine (N) +0.1 +0.0 +2.5 -0.0 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +2.1 -0.1 +0.3 -0.0 +0.1
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