Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_30075 and AO356_30080 are separated by 11 nucleotidesAO356_30080 and AO356_30085 are separated by 72 nucleotidesAO356_30085 and AO356_30090 are separated by 281 nucleotidesAO356_30090 and AO356_30095 are separated by 239 nucleotides AO356_30075: AO356_30075 - protein glxC, at 7,019,797 to 7,020,480 _30075 AO356_30080: AO356_30080 - amidophosphoribosyltransferase, at 7,020,492 to 7,021,397 _30080 AO356_30085: AO356_30085 - glutamine synthetase, at 7,021,470 to 7,022,804 _30085 AO356_30090: AO356_30090 - XRE family transcriptional regulator, at 7,023,086 to 7,023,685 _30090 AO356_30095: AO356_30095 - formyltetrahydrofolate deformylase, at 7,023,925 to 7,024,791 _30095
Group Condition AO356_30075 AO356_30080 AO356_30085 AO356_30090 AO356_30095
stress sodium fluoride 6.25 mM -0.1 -1.9 -0.2 -0.2 -0.3
motility outer cut, LB soft agar motility assay +0.1 -1.7 -0.3 +0.1 -0.3
pH Minimal media pH8 -0.1 -1.7 -0.0 -0.1 +0.1
motility outer cut, LB soft agar motility assay -0.1 -1.7 -0.3 +0.1 +0.3
carbon source D-Galactose (C) -0.1 -1.0 -0.1 -0.2 -0.1
carbon source L-Lysine (C) +0.1 -1.4 +0.1 -0.2 +0.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 -0.6 +0.1 -0.4 -0.1
stress Benzethonium chloride 0.025 mM -0.1 -0.6 -0.2 -0.3 -0.1
carbon source Carbon source D-Mannitol 5 mM +0.0 -0.8 -0.1 -0.4 -0.1
stress Cephalothin 2 mg/ml -0.7 -0.6 -0.2 +0.1 +0.1
carbon source acetate (C) -0.4 -0.8 +0.0 -0.2 +0.1
carbon source L-Asparagine (C) +0.0 -1.0 -0.1 -0.3 +0.2
carbon source L-Lysine (C) -0.3 -0.7 +0.1 -0.3 +0.2
carbon source Carbon source Sucrose 2.5 mM +0.2 -1.0 -0.0 -0.3 -0.0
carbon source D-Glucose (C) -0.2 -0.7 +0.1 -0.2 +0.1
temperature LB 30C -0.3 +0.2 -0.2 -0.1 -0.6
carbon source Fumarate (C) -0.4 -0.7 +0.1 -0.1 +0.1
carbon source Carbon source D,L-Lactate 10 mM +0.2 -0.5 -0.0 -0.4 -0.2
carbon source L-Asparagine (C) +0.1 -0.7 -0.2 -0.2 +0.3
nitrogen source Carnitine Hydrochloride (N) -0.5 +0.4 +0.0 -0.3 -0.1
nitrogen source L-tyrosine (N) +0.3 +0.4 +0.0 -0.9 -0.1
survival 4C survival; 1152 hrs -0.2 +0.3 -0.1 -0.4 +0.3
carbon source Carbon source Sucrose 2.5 mM +0.3 -0.5 +0.2 -0.1 +0.2
nitrogen source Urea (N) +0.2 -0.8 -0.3 +1.1 +0.0
nitrogen source L-Isoleucine (N) +0.1 +0.7 +0.1 -0.3 -0.2
stress Nalidixic 0.004 mg/ml -0.0 +0.9 -0.0 -0.2 -0.3
anaerobic Nitrate reduction with yeast extract +0.6 +0.8 +0.1 +0.1 -0.5
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 +1.0 +0.1 -0.1 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +2.1 -0.1 +0.3 -0.0
nitrogen source D-Serine (N) +0.5 +0.1 +0.0 +2.5 -0.0
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