Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_30005 and AO356_30010 are separated by 0 nucleotidesAO356_30010 and AO356_30015 overlap by 32 nucleotidesAO356_30015 and AO356_30020 are separated by 289 nucleotidesAO356_30020 and AO356_30025 overlap by 4 nucleotides AO356_30005: AO356_30005 - diguanylate cyclase, at 7,002,751 to 7,003,509 _30005 AO356_30010: AO356_30010 - transcriptional regulator, at 7,003,510 to 7,004,181 _30010 AO356_30015: AO356_30015 - histidine kinase, at 7,004,150 to 7,005,229 _30015 AO356_30020: AO356_30020 - hypothetical protein, at 7,005,519 to 7,006,031 _30020 AO356_30025: AO356_30025 - ferredoxin, at 7,006,028 to 7,006,957 _30025
Group Condition AO356_30005 AO356_30010 AO356_30015 AO356_30020 AO356_30025
stress nitrite 10 mM -0.2 -1.0 -1.0 -0.3 -0.8
carbon source L-Isoleucine (C) -0.1 -0.6 -1.4 -0.4 -0.3
motility outer cut, LB soft agar motility assay +0.6 -1.5 -1.0 -0.1 -0.6
stress Thallium(I) acetate 0.008 mg/ml -0.2 -0.1 -0.8 -0.1 -1.3
stress Paraquat dichloride 0.0625 mg/ml -0.5 -0.5 -0.2 -0.9 -0.1
carbon source D-Glucose (C) -0.4 -0.3 -0.3 -0.5 -0.6
nitrogen source L-tyrosine (N) +0.2 -0.5 -0.8 -0.8 -0.1
stress Chlorite 0.04 mM -0.4 -0.6 -0.2 -0.3 -0.5
stress Lomefloxacin 0.0005 mM -0.2 -0.2 -0.2 -1.1 -0.2
motility outer cut, LB soft agar motility assay -0.2 -0.8 -0.5 +0.2 -0.4
carbon source Inosine (C) -0.3 +0.1 -0.7 -0.4 -0.2
survival 4C survival; 192 hrs +0.0 -0.3 +0.2 -0.1 -1.3
stress Bacitracin 2 mg/ml -0.2 -0.5 -0.6 -0.2 +0.2
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.1 +0.2 -0.6 -0.5 -0.5
carbon source Cytidine (C) +0.2 -0.7 -0.5 -0.3 +0.2
carbon source D,L-Lactate (C) -0.5 -0.4 -0.4 +0.3 -0.1
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.2 +0.3 -1.0 -0.1 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.4 +0.2 -1.9 -0.1 +0.4
nitrogen source L-Isoleucine (N) -0.3 -0.4 -0.4 -0.3 +0.7
motility outer cut, LB soft agar motility assay +0.1 +1.1 -2.4 +1.0 -0.6
carbon source L-Lysine (C) -0.4 +0.2 -0.0 +0.5 -0.8
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.3 -0.1 +0.5 -0.9 +0.2
stress methylglyoxal 0.016 vol% -0.3 +0.1 +0.4 -0.8 +0.4
stress syringaldehyde 5 mM -0.4 +0.2 +0.5 +0.2 -0.5
stress nitrate 200 mM +0.4 -0.3 +0.3 +0.1 -0.6
stress Choline chloride 500 mM +0.1 +0.2 +0.6 -0.7 -0.2
nitrogen source L-Leucine (N) +1.1 -0.5 +0.0 -0.3 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 -0.4 +0.4 -0.2 +0.6
survival 4C survival; 360 hrs -0.0 +0.7 +0.7 -0.1 -0.1
anaerobic Nitrate reduction with yeast extract +0.7 -0.5 +1.3 +0.3 -0.0
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