Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29975 and AO356_29980 are separated by 124 nucleotidesAO356_29980 and AO356_29985 are separated by 71 nucleotidesAO356_29985 and AO356_29990 are separated by 68 nucleotidesAO356_29990 and AO356_29995 are separated by 38 nucleotides AO356_29975: AO356_29975 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase, at 6,997,473 to 6,998,324 _29975 AO356_29980: AO356_29980 - hypothetical protein, at 6,998,449 to 6,999,030 _29980 AO356_29985: AO356_29985 - alcohol dehydrogenase, at 6,999,102 to 7,000,217 _29985 AO356_29990: AO356_29990 - cupin, at 7,000,286 to 7,000,813 _29990 AO356_29995: AO356_29995 - 3-hydroxybutyryl-CoA dehydrogenase, at 7,000,852 to 7,001,700 _29995
Group Condition AO356_29975 AO356_29980 AO356_29985 AO356_29990 AO356_29995
anaerobic Nitrate reduction with yeast extract -0.1 +0.1 -0.7 -1.8 +0.2
pH Minimal media pH7 -0.3 -0.4 -0.2 -1.2 -0.3
carbon source L-Lactate (C) +0.1 -0.4 +0.4 -2.4 +0.1
motility outer cut, LB soft agar motility assay +0.6 -0.2 +0.2 -2.7 +0.1
motility outer cut, LB soft agar motility assay +0.0 -0.3 +0.0 -0.7 -0.9
stress nitrate 200 mM -0.4 +0.1 +0.2 -1.7 +0.0
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.0 +0.3 -0.4 -1.5 -0.0
stress Chlorite 0.04 mM +0.1 -1.0 +0.0 -1.0 +0.3
carbon source L-Lysine (C) +0.4 -0.2 +0.2 -1.6 -0.3
carbon source Inosine (C) +0.0 -0.5 +0.2 -0.8 +0.0
carbon source Carbon source D-Glucose 10 mM +0.1 -1.0 +0.2 +0.1 -0.3
stress copper (II) chloride 2.5 mM +0.4 -0.2 +0.4 -1.3 -0.2
motility outer cut, LB soft agar motility assay -0.1 -0.2 +0.3 -0.7 -0.3
carbon source a-Ketoglutaric (C) -0.2 -0.2 +0.3 -0.6 -0.1
carbon source Carbon source Sucrose 2.5 mM -0.5 -0.6 +0.3 -0.2 +0.2
temperature LB 20C -0.1 +0.1 -0.3 -0.6 +0.3
pH Minimal media pH6 -0.2 -0.0 +0.3 -1.1 +0.3
temperature LB 30C +0.2 -0.0 +0.0 -1.0 +0.3
carbon source Carbon source D-Mannitol 2.5 mM -0.2 -0.5 +0.4 -0.3 +0.2
stress nitrite 10 mM -0.1 -0.4 -0.4 +0.5 +0.1
stress Fusidic 0.1 mg/ml -0.4 -0.4 +0.2 +0.3 +0.0
carbon source L-Aspartic Acid (C) +0.1 -0.3 -0.1 +0.8 -0.2
carbon source Carbon source Sucrose 10 mM +0.2 -0.6 +0.5 +0.3 +0.0
motility outer cut, LB soft agar motility assay +0.3 -0.7 +0.4 +0.6 -0.1
carbon source Carbon source D-Mannitol 5 mM -0.2 -0.4 +0.4 +0.4 +0.3
stress Nickel (II) chloride 0.625 mM +0.3 -0.5 +0.2 +0.6 +0.1
stress Lomefloxacin 0.0005 mM +0.4 -0.1 +0.4 +0.5 -0.4
carbon source Carbon source D,L-Lactate 10 mM -0.1 -0.3 +0.8 +0.3 +0.4
carbon source Carbon source D-Mannitol 2.5 mM -0.0 -0.5 +0.1 +1.2 +0.2
stress Sisomicin 0.001 mg/ml +0.1 +0.4 +0.4 +1.1 -0.3
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